Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2230 |
Symbol | |
ID | 5695077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2701491 |
End bp | 2702462 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641264835 |
Product | PASTA domain-containing protein |
Protein accession | YP_001530111 |
Protein GI | 158522241 |
COG category | [S] Function unknown |
COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.746907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAGC AACTCTTAAA GCTGTCGGTT CTTTTTGTGG TCATGGCCCT GGGCGCCGGT GCCAGCGTCT ACCTGACCTT TGTGTTTCTG GTGGCATCGG AGGAGACGGT TGTGGTACCT GACATCACCG GCCGAAACGT GGCTTACGGC CTTGAGATGC TCACCGGGCT GGGGCTGAGC AGCCGGGTCA AGGCGTCGGA CTACAGCGCC ACCGTGCCCA AGTACCACGT GATCTGGCAG GACCCTGAAC CCGGTGCCCG AATCAAGCAG GGCCGCAGCG TCAGCATCAT TATTTCCAGG GGTAACAAAG AGGTGCTCAT GCCGGATCTT CGGGGCATGG GCCTGGACCA TGTTCGCATC GTGATAGAGG AAAATGGACT GGCCCGGGGG GTTTTGTCCG AGGCCCACGC TGCCGGGGTC GAGGCCCGGG CCGTTATTGC CCAGTATCCC GGTGCCGGGG TCACGATCAA CAGAGGGACG CCGGTAGACC TGCTGGTCAG TCTCGGCAAA CGGCCTGTTG CCTACGTGAT GCCCGACATA ACGGGGGACT CCCTGGCTGA AGCCATCGAC AGTCTGGATC TGCTGGGGCT GCTGCCCGGA GAGATTCGTT TCGAGGTGCG GGATACGGCT CCCAGGAACG CTGTTGTCGG CCAGGTCCCC GAGCCGGGGG CACGTGTTCT CGAAGGCAGC CGGGTCGATC TGGTGATCAA TCGGGTGAAT GCGGAGGAGG GGAGCCGGTT GCTTCAGGGT GGGGGAGGGA TACGGGTTTC CCGGTACAGG CTTGCAAACG GTTTTCTAAA CAGGCATATT AATGTGAAAC TCAACTGTAT GGGCACCTCT TTTGACCTGA TTGACGAGTT CCGGGAACCG GGTTCCGAGG TGTGGGCCTT TATTCCGGCC CACCAGGAGG CCACGGTGCT GGTGTATGAA GACGGAAAGC TGGTGAAAAC AGAGGTGTTT GAAAGCTGGT AA
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Protein sequence | MVKQLLKLSV LFVVMALGAG ASVYLTFVFL VASEETVVVP DITGRNVAYG LEMLTGLGLS SRVKASDYSA TVPKYHVIWQ DPEPGARIKQ GRSVSIIISR GNKEVLMPDL RGMGLDHVRI VIEENGLARG VLSEAHAAGV EARAVIAQYP GAGVTINRGT PVDLLVSLGK RPVAYVMPDI TGDSLAEAID SLDLLGLLPG EIRFEVRDTA PRNAVVGQVP EPGARVLEGS RVDLVINRVN AEEGSRLLQG GGGIRVSRYR LANGFLNRHI NVKLNCMGTS FDLIDEFREP GSEVWAFIPA HQEATVLVYE DGKLVKTEVF ESW
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