| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2213 |
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| Symbol | |
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| ID | 5695059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2684578 |
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| End bp | 2685300 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264817 |
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| Product | Tol-Pal system TolQ |
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| Protein accession | YP_001530094 |
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| Protein GI | 158522224 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000350133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCA AGCTTGATAT CGTCAGCATG CTGCTGAACG CTGGACTCAT GGTCCAGTTC
GTGCTGCTGC TGCTGCTCTT TTTTTCCGTC ACCTCCTGGA CGATCATTTT TATCAAGTAC
ACCTATATTC GCCACGCATT AAGGCAATCC CTGGAGTTTT CCGAATATTT CTGGAAAAAA
AGGGACTTTT CCGAGGCCTT TGCCAAGGCC AAAAATCTTG ATTCCTCGCC TGTGGCCCAG
GTGTTCCGGG CCGGGTACAG CGAGTTCAAA AGGTTCAGCA CCCCGTCTAC CCGCACCGGG
TCCGGCGAAT CGGAAAACAA TTTTGACGTG CCGGTGATCA AGAGCATTGA GCGGGCCCTG
TCCCGGGGCA TCACCGCGGA AACCGCCAAG CTCAACCGGC TGGTGCCCTT TCTGGCCACC
ACGGGCAATA CCACCCCCTT TATCGGCCTG TTCGGCACGG TGTGGGGCAT CATGAACTCG
TTTCACGGCA TCGGCGAGCG GGGTGCGGCC AGCCTGGCGG TTGTGGCGCC GGGCATCTCC
GAGGCCTTGG TGGCCACGGC CGCCGGCCTG GCCGCAGCCA TTCCCGCGGT GGTGGCCTAT
AACTACTTCA CCGGCAAGAT TCGGGTGATT GATTCGGAGA TGCGCAACTT TGCCTCCGAT
TTTCTCAACA TTATCGAGCG CCAGGTCCAT ATCGCGGCCC AGGCCAGGGG AGAGAAAAAA
TGA
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| Protein sequence | MAAKLDIVSM LLNAGLMVQF VLLLLLFFSV TSWTIIFIKY TYIRHALRQS LEFSEYFWKK
RDFSEAFAKA KNLDSSPVAQ VFRAGYSEFK RFSTPSTRTG SGESENNFDV PVIKSIERAL
SRGITAETAK LNRLVPFLAT TGNTTPFIGL FGTVWGIMNS FHGIGERGAA SLAVVAPGIS
EALVATAAGL AAAIPAVVAY NYFTGKIRVI DSEMRNFASD FLNIIERQVH IAAQARGEKK
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