Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2188 |
Symbol | |
ID | 5695034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2657588 |
End bp | 2660848 |
Gene Length | 3261 bp |
Protein Length | 1086 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641264792 |
Product | methylmalonyl-CoA mutase, large subunit |
Protein accession | YP_001530069 |
Protein GI | 158522199 |
COG category | [E] Amino acid transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00063386 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGT CGACCTATAA GCCGAAACAC GCCGTCCGGG TGGTGACCGC CACCTCCCTG TTTGACGGCC ATGACGCGGC CATCAACATC ATGCGCCGCA TGCTTCAGGA CACCGGGGTG GAGGTGATTC ACCTGGGTCA CAACCGCTCG GCCACTGAAA TCGTGGACGC GGCTGTTGCC GAGGATGCCC ATGGCATTGC CGTTTCCAGC TACCAGGGCG GTCACATGGA GTTTTTTAAA TACATTCTCG AGCTGCTGAA AGAGAAGGAT GCGGCCCATA TAAAGGTGTT CGGCGGCGGC GGCGGCGTGA TCGTGCCCGA CGAAATTCGC GAACTGGAGG CCTGCGGTGT GACAAAGATA TATTCACCCG ACGACGGGGC GAATATGGGC TTGCAGGGCA TGATCAACCA CATGGTACGG CAGCTTGATT TTGTCACGGT GGGCCGGAAA AAGGTGGACC TGTCACACCT GTCCGTTGAC CGTCCCCTGG AAGTGGCCCG AATGATTACC CGGGCCGGCC TTAAAAGCCC GCAATCCGGC GGCCTGGCCA AGACGGCCAA AAGGCTCCTG GCGGCTCAGG CCCGGGAGCG CCGGGTGCCG GTGGTGGGCA TTACCGGTAC CGGTGGCGCG GGAAAATCGT CTCTCACCGA TGAGCTGATC CTGCGGTTTC TGATGGACAC GAAAAAGCTT CGCGTGGCGG TCCTCTGCGT GGACCCCTCC CGGCGCAAGA GCGGCGGGGC GTTGCTGGGA GACCGGATTC GCATGAACGC CATCACCGAT TCCCGTGTCT ACATGCGCAG CCTGGCCACA CGGGCGTCCG CGACCGAGCT GCCCCCGGCC ATGGCCGACA TCATTCATAT TGTCAAGGCC GCCGGGTTTG ACCTGGTGAT GGTGGAAACC GCGGGCATCG GCCAGGGGGA CTCCCGCATT CATGACCTGG TGGATGTGTC GCTTTACGTG ATGACCAGCG AATTCGGGGC CGCTTCCCAG CTTGAGAAAA TCGACATGCT GGACTTTGCC GATATTGTGG CCATCAATAA ATTTGACAAG CAGGGGTCCG AGGACGCCCT TCGGGACGTT CGCAAGCAGC TTCAGCGTAA TCGCAAGTCC TTTGATTTAC CGGTGGAAAC CATGCCGGTG TTCGGCACCA TGGCGGCCCG GTTCAACGAT GAAGGGGTCA CGGCCCTGTA TCACGGCCTG CTGGACGCCA TTTGCCAGAA AACCGGGGTA AACTGGACAT CGTCTCTGAC CCGGCCCGTT GTAACCACTT CCGGGGCCAG GTCTATTATC GTGCCGCCGG AACGGGTCCG CTATCTTTCC GAGATTGCCG ACACGGTGCG GGCCTACCAC GGCCGCACTG CGGACCAGGC CGACGCCCTA AGGGCGTGCT GGCACCTTGA GGAGGTAAAA CAGCGCCTGG CCGCCGAAGG CGACAAACCA TCGGCCAGGG CCCTGGACAA GACCCTGGCC GATGCCAGGA AAAAGGTGAC GGCTGAAACG CTGGGCCTGA TGAAGCAGTG GGACGAGATG CGGGCCCATC ACGACAGCGG CGAAATGGTC TACAGTGTCA GAGGACGCGA GATCAAAGCC CCGCTTTATT GCCGGTCCCT GTCCGGCACG CCTGTTCCCA GAGTATCCCT GCCCGACTTT GCCGATCCGG GCCAGCGGTA TCAATGGATG CGCCAGGAGA ATCTGCCGGG CCGGTTTCCT TACACGGCCG GGGTCTACCC CCTTAAACGG TCCGAAGAAG ACCCCACCCG CATGTTTGCC GGTGAAGGGG ACCCGGCCCG GACCAACCGG CGCTTTAAGC TGCTGTCGGA AAATTCAGAG GCCAAGCGGC TTTCCACGGC CTTTGATTCA GTGACCCTGT ACGGTTACGA CCCGGAAAAG CGGCCCGACA TCTACGGCAA GGTGGGCACC TCCGGGGTGA GCGTATGCTC GCTGGAGGAC GTAAAGACCC TTTATGACGG GTTTGACCTG TGCGCGCCCA ACACATCGGT TTCCATGACC ATCAACGGCC CGGCCCCGAT CATGCTGGCC ATGTTTTTTA ATGCCGCCAT TGATCAGCAG GTGGAAAAGG CCGAGGCAAA AAAGAAAAGA AAGCTGTCGG CCGTTGAGCG GATCGACATC GTCAAGCACG TGCTTTCCAC CATTCGGGGG ACGGTCCAGG CCGACATTTT AAAAGAGGAC CAGGGTCAGA ATACCTGCAT TTTTTCCGTG GCGTTCGCGC TTAAAATGAT GGGCGACATT CAGGACTTTT TCATCAAAAA CCGTGTGCGA AACTTCTATT CTGTTTCGGT GTCCGGCTAT CATATTGCCG AGGCCGGTGC CAACCCCATC ACCCAGCTGG CCTTTACCCT GGCCAACGGG TTTACCTACC TGGAGTATTA CCTTTCACGG GGCATGGACA TCGACAATTT TGCCCCCAAT TTTTCATTCT TCTTTTCCAA CGGCATGGAC CCGGAATACA CGGTGATCGG CCGTGTGGCC CGCCGCATCT GGGCCGTGGC CTTGAAGGAA AAATACGGGG CTGCCGAGCG GTCCCGCATG CTCAAGTACC ATATTCAGAC ATCGGGCCGG TCCCTGCACA GCCGGGAGAT TCAGTTCAAC GATATCCGCA CCACGCTTCA GGCCCTGTGC GCCATCTACG ATAACTGCAA CAGCCTTCAC ACCAACGCTT ATGACGAGGC CATTACTACG CCCAGCGACG AATCGGTACG CCGGGCCCTG GCCATTCAGC AGATCATCAA CCGGGAATGG GGGCTGGCCA AAAACGAGAA CCCCAACCAG GGCAGCTTTA TCGTGGAAGA GCTGACAAAG CTGGTGGAAG AGGCGGTGCT GATGGAATTC GACCGGATCA CGGCCCGGGG CGGGGTTCTG GGTGCCATGG AAACCGGGTA CCAGCGCAGC CGCATTCAGG AAGAGTCCAT GCACTATGAA CGGCTCAAGC ATACCGGAGA ACTGCCGGTG GTGGGGGTCA ATACTTTCCT GCGGCCAGAC AGCGCGGACG GCGGCGAGAC CGGCCCCCTG GTGCTGGCCA GGGCCACGGA GGCGGAAAAG CGGTCCCAGC TTCGGCGCCT GGCCGCCTTT CACAAAAAGA ACGCCAACCG GTCGGAACAG GCTTTAGAAG AGTTGAAGCA GACCGTTCTT TCCGGGGAAA ATATTTTCGC CCGCCTGATG GAGACGGTGC GGTGTTGTTC TCTGGGCCAG ATCACGCAGA CGTTGTACCG GGTGGGGGGG CAATACAGGA GAGGGATGTA A
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Protein sequence | MDQSTYKPKH AVRVVTATSL FDGHDAAINI MRRMLQDTGV EVIHLGHNRS ATEIVDAAVA EDAHGIAVSS YQGGHMEFFK YILELLKEKD AAHIKVFGGG GGVIVPDEIR ELEACGVTKI YSPDDGANMG LQGMINHMVR QLDFVTVGRK KVDLSHLSVD RPLEVARMIT RAGLKSPQSG GLAKTAKRLL AAQARERRVP VVGITGTGGA GKSSLTDELI LRFLMDTKKL RVAVLCVDPS RRKSGGALLG DRIRMNAITD SRVYMRSLAT RASATELPPA MADIIHIVKA AGFDLVMVET AGIGQGDSRI HDLVDVSLYV MTSEFGAASQ LEKIDMLDFA DIVAINKFDK QGSEDALRDV RKQLQRNRKS FDLPVETMPV FGTMAARFND EGVTALYHGL LDAICQKTGV NWTSSLTRPV VTTSGARSII VPPERVRYLS EIADTVRAYH GRTADQADAL RACWHLEEVK QRLAAEGDKP SARALDKTLA DARKKVTAET LGLMKQWDEM RAHHDSGEMV YSVRGREIKA PLYCRSLSGT PVPRVSLPDF ADPGQRYQWM RQENLPGRFP YTAGVYPLKR SEEDPTRMFA GEGDPARTNR RFKLLSENSE AKRLSTAFDS VTLYGYDPEK RPDIYGKVGT SGVSVCSLED VKTLYDGFDL CAPNTSVSMT INGPAPIMLA MFFNAAIDQQ VEKAEAKKKR KLSAVERIDI VKHVLSTIRG TVQADILKED QGQNTCIFSV AFALKMMGDI QDFFIKNRVR NFYSVSVSGY HIAEAGANPI TQLAFTLANG FTYLEYYLSR GMDIDNFAPN FSFFFSNGMD PEYTVIGRVA RRIWAVALKE KYGAAERSRM LKYHIQTSGR SLHSREIQFN DIRTTLQALC AIYDNCNSLH TNAYDEAITT PSDESVRRAL AIQQIINREW GLAKNENPNQ GSFIVEELTK LVEEAVLMEF DRITARGGVL GAMETGYQRS RIQEESMHYE RLKHTGELPV VGVNTFLRPD SADGGETGPL VLARATEAEK RSQLRRLAAF HKKNANRSEQ ALEELKQTVL SGENIFARLM ETVRCCSLGQ ITQTLYRVGG QYRRGM
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