Gene Dole_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2175 
Symbol 
ID5695021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2641546 
End bp2642202 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID641264779 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530056 
Protein GI158522186 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTGA CAGGAGCAAA AAAACCCGCG CGCACCGCGC TGCGACGACA GCGGGAAAAG 
GAGCAGCGTC ACGAAACGAT TCTGGGGGCC GCGGAAACGC TTTTTGTAAA AAAAGGGTAT 
CACCAGACCA GCCTGGAAGA GATCGCCGAG GCGGCCGAGG TGTCGGTGGG CACGGTCTAT 
TTTTATTTCA AGAACAAGGA AGAGCTGCTG ATCAGCCTGA TGCAGAAGGT GGGCGCTCAC 
CTGCGTGTCA TGCTCCAGGA GGCGTTTTTA AAAAAACAGG GAACCATGGA GGGGATCGTG 
GAGGCGGGCA CTGTTTTTTT CCAGGATTTC TGCCGCTCCC ATCCCGGCCA TGCCTCCATC 
TTTTTCAGGG AGTCGGGCGG CCGAAGCGCC CGGGTGGAGA CCGAGCGCAA GCGGCTTTAC 
GTCAAGCTGA TTTCCGACCT TGAAAAGGCC CTTGTTCGGG TCCGGTCAGA GACCGGGACA 
ACCTATCTTT CCGCCGGTTC AGAAGAGCTG ATGGCGGTGT GCATTCTGGG CATCTATGAG 
CGGGTGGCCG AGTATTACCT GTTGTGGCAC GACCGGGCCG ACGATATTAC TGAGGCCGGC 
CGCGAGGCCG TGGCCTTTAC CGTGGCCGGT ATTCAGGGGC TGATGACGGG CCGATGA
 
Protein sequence
MPVTGAKKPA RTALRRQREK EQRHETILGA AETLFVKKGY HQTSLEEIAE AAEVSVGTVY 
FYFKNKEELL ISLMQKVGAH LRVMLQEAFL KKQGTMEGIV EAGTVFFQDF CRSHPGHASI 
FFRESGGRSA RVETERKRLY VKLISDLEKA LVRVRSETGT TYLSAGSEEL MAVCILGIYE 
RVAEYYLLWH DRADDITEAG REAVAFTVAG IQGLMTGR