Gene Dole_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2149 
Symbol 
ID5694993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2608097 
End bp2608828 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID641264751 
Producthypothetical protein 
Protein accessionYP_001530030 
Protein GI158522160 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAGA TAACCAGAGA TGAGATGGCG GTCCTGGTGG CGCTTCAGGA AACGGAGAGC 
AGCAAGGACC GGGTCGCCGC GGTTTTAAGG CAAGTGCCGG AGCGACTGGC CCGGTTGGAC
AGGGCGCGAC AGGAGGTGGA ACAGCGGTTT CAGGAAAAAG AGGCCCGGGT TCTGGAAAAG
CGGAAAACCT ACAAGGATTT GGAGCAGGAG GTCAAAAGCC GGCAGGATGC CATTAAAAAA
AGTGATGCCA AGCTTTTTGC CATCAAGAAC AACAAGGAGT ACCAGGCCGT GTTAAAGGAG
ATTGATGATC TCAAGCGGCA GTCCGCCAAA ATCGAGGACC AGATGCTGGA TCTGCTTTTT
TCTGTGGAGA CCGAGGAAGC GGCCCTGATG GAGGAGCGAA AGGACTGCGA CGCGGAGAAA
GAGCGTATCG CGGAAGAAGA GGCGCAGGTG GAAACGGAAC GCGCCGGACT GGAGCAGGAG
CTTGCCGAAC TCGACAGTGC GGCACAATCG GTGCGGGGCA GGGTTCCTCC GGGGCTGATG
GGCGCTTACC AGCAGGTCCG CAAGCGGGTG CCCACCGGCG CCGTTCTGGC GGCGGTGGAA
AATTACGTCT GCCAGGGATG CTTCATGAAT ATACCGCCCC AGACCTATAA CGAATTGCAC
CGCTCCACCA CATTGAAATA TTGTCCGTTT TGCACTAGAA TCATTTATCA TAACGGTAAT
TCACAGGAGT AA
 
Protein sequence
MVEITRDEMA VLVALQETES SKDRVAAVLR QVPERLARLD RARQEVEQRF QEKEARVLEK 
RKTYKDLEQE VKSRQDAIKK SDAKLFAIKN NKEYQAVLKE IDDLKRQSAK IEDQMLDLLF
SVETEEAALM EERKDCDAEK ERIAEEEAQV ETERAGLEQE LAELDSAAQS VRGRVPPGLM
GAYQQVRKRV PTGAVLAAVE NYVCQGCFMN IPPQTYNELH RSTTLKYCPF CTRIIYHNGN
SQE