| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2110 |
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| Symbol | |
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| ID | 5694953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2562757 |
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| End bp | 2563755 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641264711 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001529991 |
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| Protein GI | 158522121 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000613072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA AAAAAGAGAT CACGGACATC ACTCAGCAGG CCATTGATGT TCTGAAGAAT
GAGGCAAAAG GAATTCTGGA GGTGGCCGCC AACCTGGACC ACCAGTTTGA AAAGGCGGTG
GACCTGATCT GCCGGTCAAA AGGCCGGCTG GTTGTCAGCG GCATCGGCAA ATCGGGCATC
GTGGGCCAGA AAATCGTGGC CACCCTCAAC AGCACCGGCA CCCGTGCCCT GTTTCTCCAT
CCGGTGGAGG CCATGCACGG CGACCTGGGC ATCGTGGGGC CGAAGGACGT CTTTCTGGGC
CTCTCTAACA GCGGAGAGAC CGAAGAACTT ACCGGCCTGA TTCCCACAAT CCGCAACGTG
GGCTGCAGGG TAATCGCCTT TACCGGCAAT ACCCACTCCT CCCTGGCCCG GCAGAGCGAT
ATCGTAATTA ATGTGGGCGT GAAAAAAGAG GCCTGCCCCC TGGGACTGGC CCCCACTACC
AGCACCACGG CCCTTATGGC CATGGGCGAC GCCCTGGCCG TGTCCTTGAG CATCAGAAAA
GACTTCAAGT CCAGTGATTT CCAGCGGTTC CACCCCGGCG GCTCCCTGGG CCGGCGCCTG
GCCCTCAACG TATCGGAGAT CATGCTCACC GGTGACAGGG TGCCCGCGGT TCCGGTCAAA
ACCCCCATTG AGGAGGCCCT GGCCGTCCTG GACCGTCAGA ACCTGGGGGC ACTGCTGGTG
GTCAGAAAAA ACAACACCCT GGCAGGCATT CTGACAGACG GTGACCTTCG GCGGTTGTAT
CTGGCAAAAG AACCCCTGTC GGGCGGCCCC GTGGACAGCA TAATGACGAA AAACCCTTTG
ACCGTCCATC CGGACTCCCC GGTCTACGAC GCACTGAACA TCCTGGAGCA GCACCAGGTC
ACGGCATTGC CGGTGACCGC CGCCGGCAAA AAGGTGTGTG GCATTCTGCA CCTGCACGAC
ATCCTGGGCA AAGGGGCGTT CAAGTTCAAC GGCCGGTAA
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| Protein sequence | MKQKKEITDI TQQAIDVLKN EAKGILEVAA NLDHQFEKAV DLICRSKGRL VVSGIGKSGI
VGQKIVATLN STGTRALFLH PVEAMHGDLG IVGPKDVFLG LSNSGETEEL TGLIPTIRNV
GCRVIAFTGN THSSLARQSD IVINVGVKKE ACPLGLAPTT STTALMAMGD ALAVSLSIRK
DFKSSDFQRF HPGGSLGRRL ALNVSEIMLT GDRVPAVPVK TPIEEALAVL DRQNLGALLV
VRKNNTLAGI LTDGDLRRLY LAKEPLSGGP VDSIMTKNPL TVHPDSPVYD ALNILEQHQV
TALPVTAAGK KVCGILHLHD ILGKGAFKFN GR
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