| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2061 |
|---|
| Symbol | |
|---|
| ID | 5694904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2512505 |
|---|
| End bp | 2513518 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641264662 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001529942 |
|---|
| Protein GI | 158522072 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4139] ABC-type cobalamin transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0286946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA CCGGGGCCTC TCTGATTTCC CGCATCTGCC TGCTCTCCCT GCTGCTGTTC
GGTCTGCTGG TGGGCGTCGG CATTCTGGGC ATTGCAAGGG GATCGTCGGG ATGGGAAATT
GGCGCTATTT GCAAAAGCCT GATCCGCATG GATACCGCCG ACCCGGTGCT CACCACCATT
ATCTGGCGCA TCCGCCTGCC CCGGGTCCTG CTGGCGGCCC TGGTGGGAGC CTCGCTTTCC
GCCGGGGGCC TAGTGTTTCA GGCCCTGCTG CGCAACCCCC TGGCTGAGCC TTACATCCTG
GGAATTTCCG GCGGGGCCGC CGTGGGCGCG ATTATCGGAA TCCTGCTGGG GCTGTCCCCG
TTTCCCGGTG TAAGCATCGC GGCCTTTATC GGCAGCGGGG CCTGTCTGCT GCTGATCCTG
TTCATGGCCA CCGGCAGAAC CATTCTCAAA AACGAGTCCC TGCTGCTCTC CGGCGTCATG
ATCAACGCCT TCTGCTCCGC CATCATCATG TTCCTGATCG CCATCACCCA GGACGCAAGA
ATTCACAACA TCATGTTCTG GCTCATGGGC GACCTTTCCA TGGTGGGACT GAAGCAGGTG
GCCATTCTGG CCGCGCTGGT GATCCCCTGC TTTATCGTTG TGTTCAGGTA TGCCAACATT
CTGAACCTGA TCCTGCTGGG CCGGGAGATG GCCCAGACCA TGGGGGTCAA CATTCGCGTG
GCCGGGGCCG TGCTGCTGGT GGTGACCTCG TTCATGGTCA GCGCCACGGT AAGCCAGTGC
GGCCTGCTGG GATTTGTGGG GCTGGTGGTG CCCCATTTCT TCCGGCGCCT GATCGGCGCA
GACCACCGTC TTCTGGTGCC GGCCTGCCTG CTGGGCGGCG GCGCCTATAT GGTGCTGTGC
GACATGCTGG CCCGGACCCT GCCGGCCCAC GGCGAAATGC CGGTGGGCGT GATCACCGCC
ATTCTCGGGG CGCCACTGTT TATCTATCTT TTGAAACGGC CGGACAAAAA ATGA
|
|---|
| Protein sequence | MNNTGASLIS RICLLSLLLF GLLVGVGILG IARGSSGWEI GAICKSLIRM DTADPVLTTI
IWRIRLPRVL LAALVGASLS AGGLVFQALL RNPLAEPYIL GISGGAAVGA IIGILLGLSP
FPGVSIAAFI GSGACLLLIL FMATGRTILK NESLLLSGVM INAFCSAIIM FLIAITQDAR
IHNIMFWLMG DLSMVGLKQV AILAALVIPC FIVVFRYANI LNLILLGREM AQTMGVNIRV
AGAVLLVVTS FMVSATVSQC GLLGFVGLVV PHFFRRLIGA DHRLLVPACL LGGGAYMVLC
DMLARTLPAH GEMPVGVITA ILGAPLFIYL LKRPDKK
|
|---|
| |