| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2040 |
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| Symbol | |
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| ID | 5694883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2472529 |
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| End bp | 2474157 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264641 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001529921 |
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| Protein GI | 158522051 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGG TACGCATATA CGACACAACC CTGCGGGACG GTATGCAGGG CGACACCATC
AACTTTACGG TGGATGAAAA GATCCGCGTC GCCCGTCAAC TGGACGACCT TGGTGTTCAT
TACATCGAGG GCGGATGGCC GGGATCCAAT CCCAGGGATG TCCAGTTTTT TGAAAAGGCC
GCGAAGATCG ACTTCAAAAA CGCCCGGCTC ACCGCCTTTG GATCCACCCG GCGGGCCGGC
CTGGCCGTGG AAAAAGACGA TAACATTCGG CTGCTGCTGG AATGCGGGGC GCCTGCCGTG
GCCCTGGTGG GAAAGACATG GGATCTGCAT ATCACCGAAG TGATGAGCAA CACACTTGAA
AGCAACCTGG AGATGATTCA CGACTCGGTG GCCTACGTCA AGTCCCACGG CCGTGAGGTG
TTCTTTGACG CCGAGCACTT TTTCGACGGC TGTACCCACA ACAGGGAGTA CACCTTCAAA
GCGATTCTGA CCGCGGCCCA GGCAGGGGCC GACGCCGTGA TCCTGTGCGA CACCAACGGC
GGCGCCCTGC CCCACGACGT GGAGGCCATC ACCGCCGAGG TATGCACCAC ACTGGCGGAC
CGGTTTCCCG GTCCGGACGG CGGCTCCACC GTGCAAGTCG GCATTCACAC TCATAATGAC
AGTAACCTGG CCGTGGCCAA CAGCATTGCC GCAATACGGG CCGGGGCACG AATCGTCCAG
GGCACCATCA ACGGCTATGG GGAGCGGTGC GGCAACGCCG ACCTCACCTC CATTATCCCG
ATTCTTGCCG CAAAAATGGA ATATGACTGC ATCACACCGG AAAATCTTAA AAAACTGCGG
AAGGTGTCCC GGTTTGTCAG CGAAACCGCC AACATGACAC CGGTCAACAG CCGGCCCTTT
GTGGGCAAAA GCGCCTTCTC CCACAAGGGC GGCCTTCATG TCAGCGCCAT CATGAAAAAC
CCCCGGGCCT ACGAGCACAT GGACCCGGAA CTGGTGGGCA ACAAGCGGCG GGTCCTGATA
TCCGACCTGT CGGGCCGAAG CAACGTCACC TACAAGGCCA GGGAACTGGG CATCAATACC
GACACCGAAC ATTTTGACGT GGACCGCATC CTGTCCGAAG TCAAGATGCT GGAGTTAGAA
GGATTCCAGT TCGACGCGGC GGACGGCTCC TTCAAGATCG TGATGGAAAA GATTTCCGGC
CTGTATACCC CCCTTTTTGA TCTGCTCTCC TTCCGGGTGA CAGTGGAAAA AGAGAAAGAC
CGGCCCTGCA CGGCCCACGC GACCATACGG CTGGGGGTGG GAGAGTTGGA GACCACCACC
GCCGCAGAGG GAGACGGCCC GGTGAGCGCC CTGGACACGG CCCTGCGAAT GGCCATCGCC
GAGTTCTATC CCGATTCTTT GGGCCTGGAC GCCATGCAGC TGGTGGACTT CAAGGTGCGG
GTCCTGGACG GACGGGACGG CACATCGGCC AAGGTCCGGG TGCTGATCGA CTCCAGGGAC
GAAGACGAGG TGTGGGGCAC CATCGGCGTG TCGGAAGACA TCATCGAGGC CAGCTGGGAG
GCCCTTGCCG ACAGCTGCCA GTACAAACTT TCCAAGGAAC TGAACAAGAA AAAGAAAAAA
CAGGACTAG
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| Protein sequence | MEQVRIYDTT LRDGMQGDTI NFTVDEKIRV ARQLDDLGVH YIEGGWPGSN PRDVQFFEKA
AKIDFKNARL TAFGSTRRAG LAVEKDDNIR LLLECGAPAV ALVGKTWDLH ITEVMSNTLE
SNLEMIHDSV AYVKSHGREV FFDAEHFFDG CTHNREYTFK AILTAAQAGA DAVILCDTNG
GALPHDVEAI TAEVCTTLAD RFPGPDGGST VQVGIHTHND SNLAVANSIA AIRAGARIVQ
GTINGYGERC GNADLTSIIP ILAAKMEYDC ITPENLKKLR KVSRFVSETA NMTPVNSRPF
VGKSAFSHKG GLHVSAIMKN PRAYEHMDPE LVGNKRRVLI SDLSGRSNVT YKARELGINT
DTEHFDVDRI LSEVKMLELE GFQFDAADGS FKIVMEKISG LYTPLFDLLS FRVTVEKEKD
RPCTAHATIR LGVGELETTT AAEGDGPVSA LDTALRMAIA EFYPDSLGLD AMQLVDFKVR
VLDGRDGTSA KVRVLIDSRD EDEVWGTIGV SEDIIEASWE ALADSCQYKL SKELNKKKKK
QD
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