| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2014 |
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| Symbol | |
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| ID | 5694854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2440159 |
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| End bp | 2443143 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264612 |
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| Product | peptidase C25 gingipain |
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| Protein accession | YP_001529895 |
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| Protein GI | 158522025 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0011841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAGGTTTTCG GCAGTTGGTT TTCGGGCTGG TTCTGAGTTT TTGGCTTCTG
GGACCGGCCC ATGCCGGGTG GATTGCCGCG GGCAGCCACA AGGCCGGGCC ACCGGCCCTT
GAAACTGTCC GGTCAGATTC TTCCGGAATG GTGATCGATC TTGATATTCC CGGTCTCCAT
ATAACGGAAA CCCTGCGCGA CGGCATGGTG TACCACGGCA TATCAGTGCC GGGCGGGGGC
CGTCTTTCCG GTATCGGCAA ACCGTCCCTG CCTTTTGTCA GCCGGTATGT GGCGGTGCCG
CAAGGCGCAA CCGCTTCTGT CAGGGTGATG GATGCCCGGT TTGAGGAGAT GACCGGGTAT
AACGTGGTTC CGGCCCAGGC CCCACTGCCG GAAAGCAACA CCGCAAAGGG CCCCCCTTTT
GAAAAGGACC GGGTCGCCTA CGGAGAAAAC GGGTTTTTCC CACGGCAGGT GGCTCAACTG
GAGGGGCCTG TCTCCATTCG GGGGTGTGAA ACATCCCTGC TGCAGCTCTT CCCTGTGCAG
TTCAATCCGG TCTCCCAAAC CCTGAGGGTC TATTCCCGCA TCACCGTTCA GTTGACTTTT
GACGGGGGAA CCCGTCGCTT TATCGACCGG CGGAAGCACT CCCGGTCCCT GGCCCCGGTT
TTTGAGGGCC TGTTTTTAAA TGCCCCCCTG GAGATGGACA GCCCACCCCT CACAAAAGCC
GATGACCGGT CAGTAACCGC CAAAAGCGCC ACCGACGATG CCGCGCTTCT GTTGATTATC
TCTCCGCCGG AACTGGTCGC CGCAGCCGAC CGGCTGGCCA ACTGGAAACG GGCCCAGGGT
ATTTTGACCG AGGTGCGGAC CACCGGCCAG ACCGGGACCA CCGCAGCAGA AATACAGGCG
TTTATTCAGG ATGCCTACGA TACATGGTCC ATACCCCCCT CTTATGTGCT GCTGGTCGGG
GATGTGGAGT TCATTCCCAC TCACCGGGGG GATGGGTGCG GCACCGATCT GTATTATGCC
ACGGTGGACG GGGACGACTA TTTTCCGGAT TTGAGCCTGG GCCGGCTCTC CGTGGACACA
CTGGATCAGG CCATCAAGCG GGTTGAGGAT ATTATCCGGT ATGAACTTTC TCCGCCTGCC
GGGGAGGGGT TTTATCAGAA CGCGGCCATT GTGGCCTATT TCCAGGATAC CAGCCCTCCT
TACAATTATG CGGACCGCCG GTTTCTCCAG TCCGCCGAGG ATATGGCCCT CTTTTTTTCT
GACCCGGCCT ACCTGAACGC CTACGATGTG GATCGGATTT ACTATACCGG ATACCGATCT
CCCCAGAACT GGAATAACGA TTCCTGGAAT TTCGGCACTA CGGGCGTGCT TTCCGGCGGC
CCCGGCGATT CGATACCGTT CTATCTGTTG GAGAGCAACG GCTTTGCCTG GGACGGCGAT
GCCGTTGACA TATCAACGGC CGTAAACGCG GGCCGTTTTC TGGTAACCTA CAGGGGTCAT
GGCCAGACCA GCCGGTGGGA CAGTGTCACC TATACCACCT CCGATGTTTC CGGCCTGCTA
AATCAGGACC TGCTGCCCGT GGTATTCAGC GTCACCTGCC TGTCCGGCAA GTTTGACATG
GAAAGTGTGG GTAACAACAC CCCCTGTTTT TCCGAATCAT GGGAGCGCAA CCCGGACGGC
GGGGCCGTCG GTGTTGTGGC CGCCTCTGAA ACCACCTACA GCGGCCACAA CGACCGCCTG
TTCTGGGGGT GGATGGAGGC ACTGTGGCCC AACTTTCCGG AGGACTACCA TCCTTCAGAC
ACGCCGTTTG ACCAGCCTGC ATGGGAAATG GGCCCGGTGT TCAACTACGG CAAATACTAC
TATGCCACCT GGTATGAAGA AGAACGTTAC CGAAAACTGG AGTTTGAGCG CTTTCACTGG
TTCGGCGACC CCACCATGCG GCTCTGGACA GGGGTTCCTC AGGATTTGAC GGTTTCCGAT
TATGCCATTG ACGCCGGGTC TGGGGGCCTG GAGATCACCC TGGGCCAGGC CGGAGCCGTG
ATCTGCGTTT CGCGGGACGG CGTTATCCTG GGCAAGGGCG TCTCTTCCGG CGGCACTGAT
CTTGTGGCCT GTGCCCCGCC CCTGGCAGCC GATGATGCCA TCCTTGTGGT TGTTACCAAA
CCGAATTTCC GGCCCTTTGT GGCTGTGACC GAAGAAGACG CGGATGCGCT GCCCACGCTG
CTGGAAATCC TCACCGGCAC CAGCCCCCAT GACGGAGACA CCGATGACGA TGGCATTGCC
GACGATGTGG AGGATGGCAA TTTAAACGGC CTGGTGGATG AAGATGAGAC CGACCCCCGG
AACATCGACA CCGACGGCGA CGGGATCCAG GACGGCACGG AGAAGGGGAA AACCTTGGCT
AATATTCCCG ATGATACAAA CAGGGATGTA TTTGTGCCTG ACCTTGACGA CACCACCACC
ACCGATCCGC TCAATTCTGA CACCGACGGA GACTGCGCGT TCGACGGCCA GGAAGATGCC
AACGCCAACG GCCGGTTGGA CGATGATGAA ACCGATCCGA ATGTTTACGA TAACCTGGCT
CCGCCGGTGG CCAATGCCGG TGCCGCTCAG TCCGTTCGGG AGGGGACAAC CGTCCGGCTG
GACGGGGCCG GCTCATACGA TGCCTGTCAG ACGCTGCTCT CTTTTTTCTG GGAGCAGGTG
TCCGGGCCGT CAGTAACCCT TTCCGACTCC GCAACGTCCC GTCCCACCTT TACCGCGCCG
ACGGTTGGTT CAGCCGGGAC TGCGCTGGTG TTCCGTCTGA CCGTGGATGA TGGTGATTTT
TTCGATACCG ATACCTGCCA GGTAACGGTT ACCGACACAC CGCCGCCGTC TGAGGATGAT
GACGACAGCG ATGACGATGA TGATAATGAT GATAGCGATC CGCCCCCCGC GGAGGGCGGT
GGGGGTGGTG GCTGTTTTGT CGAAACCGTG CTGTCGTTGA AGTAA
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| Protein sequence | MKKTGFRQLV FGLVLSFWLL GPAHAGWIAA GSHKAGPPAL ETVRSDSSGM VIDLDIPGLH
ITETLRDGMV YHGISVPGGG RLSGIGKPSL PFVSRYVAVP QGATASVRVM DARFEEMTGY
NVVPAQAPLP ESNTAKGPPF EKDRVAYGEN GFFPRQVAQL EGPVSIRGCE TSLLQLFPVQ
FNPVSQTLRV YSRITVQLTF DGGTRRFIDR RKHSRSLAPV FEGLFLNAPL EMDSPPLTKA
DDRSVTAKSA TDDAALLLII SPPELVAAAD RLANWKRAQG ILTEVRTTGQ TGTTAAEIQA
FIQDAYDTWS IPPSYVLLVG DVEFIPTHRG DGCGTDLYYA TVDGDDYFPD LSLGRLSVDT
LDQAIKRVED IIRYELSPPA GEGFYQNAAI VAYFQDTSPP YNYADRRFLQ SAEDMALFFS
DPAYLNAYDV DRIYYTGYRS PQNWNNDSWN FGTTGVLSGG PGDSIPFYLL ESNGFAWDGD
AVDISTAVNA GRFLVTYRGH GQTSRWDSVT YTTSDVSGLL NQDLLPVVFS VTCLSGKFDM
ESVGNNTPCF SESWERNPDG GAVGVVAASE TTYSGHNDRL FWGWMEALWP NFPEDYHPSD
TPFDQPAWEM GPVFNYGKYY YATWYEEERY RKLEFERFHW FGDPTMRLWT GVPQDLTVSD
YAIDAGSGGL EITLGQAGAV ICVSRDGVIL GKGVSSGGTD LVACAPPLAA DDAILVVVTK
PNFRPFVAVT EEDADALPTL LEILTGTSPH DGDTDDDGIA DDVEDGNLNG LVDEDETDPR
NIDTDGDGIQ DGTEKGKTLA NIPDDTNRDV FVPDLDDTTT TDPLNSDTDG DCAFDGQEDA
NANGRLDDDE TDPNVYDNLA PPVANAGAAQ SVREGTTVRL DGAGSYDACQ TLLSFFWEQV
SGPSVTLSDS ATSRPTFTAP TVGSAGTALV FRLTVDDGDF FDTDTCQVTV TDTPPPSEDD
DDSDDDDDND DSDPPPAEGG GGGGCFVETV LSLK
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