Gene Dole_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1939 
Symbol 
ID5694779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2342548 
End bp2343321 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID641264537 
ProductTetR family transcriptional regulator 
Protein accessionYP_001529820 
Protein GI158521950 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAA ACAACCACCG CAGACCCCGC AAAAAACCGA GGCAGGAAAG AGCAAAAGTT 
ACGGTGGATG CTATTTACGA GGCCGCGTTA CAACTGTTTG TAATAGATAA CTACAGCGCC
GTGACAACCG ACAAGATAGC CGAACGGGCC GGGGTTTCCA TCGGTACACT TTATCAATAC
TTTCCCAACA AGGAATCGAT CCTGGTCGGT CTGTGGGACC AGGTGTTTGA TGCTGTCGTT
ATCGGAGATA CCACCCATTC TCTTCATGGA TCCGAAATTA CAGAAGAGGA AAAAGTCCCG
GAACAGGATG GAAGTGTCGC CGACGAAAAT GGCTTGAAGC GTATCGCCGG TGTATATATT
GGTACCTATA CCGGTGTGTT GGCAGGAACT ATCGAGGGGG CGATTTTTAA TATTAAACAT
CGGTTTAAAT TTCGAAGCAC GTGGCGGTTT GATCTGGATG AGGAAAGCGT AAAACTTGTC
CTCGAGAACC TTCCGGTTAT TGAGCGAATC GCCGGTACAG GAACCCTGGA CCCCCCCACC
GGTTTTATGA AAATGGTTTT TCAGGCACCA ATCATGGGGA AGCTGCCGGG AACCGGCTGG
TTTGATGGAG GCAACTTCTC CTTTTCTATC CCCCGCGTTG ATTTTGCAAT ATCAGGGGTC
TTTGCCTCGG ACGGTTTGGC TTCAGGTACC TGGAAATTTA ATATTTCGTT TGTCGTCTTA
AAAGTGTCTG CAAAAGGAGA CATGTCCGGC GAATTGAAAA GGACCAACGC TTAA
 
Protein sequence
MSENNHRRPR KKPRQERAKV TVDAIYEAAL QLFVIDNYSA VTTDKIAERA GVSIGTLYQY 
FPNKESILVG LWDQVFDAVV IGDTTHSLHG SEITEEEKVP EQDGSVADEN GLKRIAGVYI
GTYTGVLAGT IEGAIFNIKH RFKFRSTWRF DLDEESVKLV LENLPVIERI AGTGTLDPPT
GFMKMVFQAP IMGKLPGTGW FDGGNFSFSI PRVDFAISGV FASDGLASGT WKFNISFVVL
KVSAKGDMSG ELKRTNA