Gene Dole_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1874 
Symbol 
ID5694714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2269958 
End bp2271046 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID641264472 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001529755 
Protein GI158521885 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACG ACATTTACCA ACAACTCGGC GAGCGGCTCA ACAAAAACTT CATGCGCCTG 
CCCCTGGGCG AACCGGTGCT GGCGTTTCTT AAAAAGGCCT TTACCCCGGC CCAGGCCGAA
ATCGGGGCCG CCTTTCCCAT GGGCGCTCAC CCTCTGGAGG ATCTGGCGAA GGCCTTAAAC
CGGGATCCTG ACGAACTGTT TGCCGCCCTG GATGCCATGG CAGACGAAGG ACTGATCTTT
ATTCACAGAG ACGAGGCCGG CCAGAACCAC TACTCCCTGC CTCCCTTTTT CCCCGGCATT
GTAGAATTTC AGACCATGCG CGGGGCTGAA AACCAGCGGG AAAAAGAGAT GGCGCATGCC
GTCAAAAACA TGATGGACTA CCTGGACGAG GTGGGAAAAG AGCTGTTTGA AAAACCGGAG
GTGGCCAACA AGGTGCTGCC CGCGGCCCTG CGCACTTTGC CCGTGGAAAC ACAGATATCT
ACCGATCCCA CGGTGATGCC CTTTGAGCAG GTCAGCGCCA TGATCGACGG TGAGACCTCC
TTTGCCGCGG TCTTCTGCCA CTGCCGGCAG CAGGCCAAGC TCACAGGCAA TCCCTGTAAA
ATAGAAAACG TGCCGGAGCG CACCTGCTTT TATTTCGGAG CCGTGGCCGA CTTCATGGTG
GAGCGGCGCT TTGCCCGGCG CGTGTCAAAA GAGGAGTGCC TCGAGATTCT AAAACAATGC
GAGGCCGCCG GCCTGGTGCA CAACATCAAC AACTACCTGG GCCGGTCCCT GGTGCTGTGC
AACTGCTGTT CCTGCTGCTG TGATTTTCTG GCACGAATGA AAAAATACCG GGGCCTGCAA
AGCGTGGCCC GGTCCAACTT TGTGGCGCGC GTAAACCCGG ACAACTGCAC CGGGTGCGGC
ACCTGCGTGG AGCATTGCCA GATGGAGGCC CTGACCCTGG ATAACGACAT GGTTGTGCTT
CAGGAAAGCT GGTGCATTGG ATGCGGCAAC TGCGCGGGGG CCTGCCCTTC GGAAGCCCTG
GTCATGGTCC GCCACTCGAC CACGAAACCC ATCGAGTTTA ACTTCCCCTT CCCCGGCCTG
GGGCTGTAG
 
Protein sequence
MADDIYQQLG ERLNKNFMRL PLGEPVLAFL KKAFTPAQAE IGAAFPMGAH PLEDLAKALN 
RDPDELFAAL DAMADEGLIF IHRDEAGQNH YSLPPFFPGI VEFQTMRGAE NQREKEMAHA
VKNMMDYLDE VGKELFEKPE VANKVLPAAL RTLPVETQIS TDPTVMPFEQ VSAMIDGETS
FAAVFCHCRQ QAKLTGNPCK IENVPERTCF YFGAVADFMV ERRFARRVSK EECLEILKQC
EAAGLVHNIN NYLGRSLVLC NCCSCCCDFL ARMKKYRGLQ SVARSNFVAR VNPDNCTGCG
TCVEHCQMEA LTLDNDMVVL QESWCIGCGN CAGACPSEAL VMVRHSTTKP IEFNFPFPGL
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