Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1838 |
Symbol | |
ID | 5694678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2222633 |
End bp | 2224990 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641264436 |
Product | O-antigen polymerase |
Protein accession | YP_001529719 |
Protein GI | 158521849 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAA TAAGTCGATT TTTATATCTG GCAACCCTGG TCTTTGCGCC CCTGGCGTTC GGCAGCGTGG AGTCCTGGGC CTTCTTCTTC CTGACCCTGC TCACCGGTGC CGCCATCAGC TTTTACCTGC TTCACACCCG GCGCCATGCC GCCCCCATCT ACCGGGTACC CTGCATGTTA CCCCTTGCCC TGCTTGGGCT TTTCATCTTC TTGCAGATCA TCCCCCTGCC GCAGGCTGTC CTGTCCCTTT TGTCTCCCAA CGCCGCCCAG CTCCGCAACG AAACCATCGG CATTCTTCTA CCGGACCGTG CCTGGCCCCT TACACTGAAC CTTCACGCCA CCCTGTTTGA ACTCTGTCGC TGGCTGCTGT GGGTCGGTTT CTACTGGATT TCTGTTCAGC TCCTGTCGGA CAAAGCAATG TTGCGCCGCA CCCTGCTGTT TCTGGCCTTT TTTGCCGGCA TTTTTGCCTT TTCGTCCATC CTTCAGCACA TTTTCACAGA CAACCGTGCT TTATGGTTCC GCTATATATC CGTGCAGTCC TGCTCGATAT TTGGCTCCTA TATTAACCGC AACCACTACG CCGGCCTTAT GGCCATGCTT TTTGGTCCCA CCCTTGGCCT GTTGCTGGCG CTTCGCCCCC CCCGTCAGTT CGGCACCATG CGCGAAAAAA TCCTGGGCCT GTTTGAAGAA AAAGAGACCC CCCTGTTTAT TCTTCTTCTG CTTTCGGCAT CAATCATGGT GATGTCGGTT TTTATCAGTC TCTCCAGGGG CGGCATGACC AGCCTGTGCA TATCCAGCCT GTTTTTTATT CTGATGGCAT CCGGAAAAAA ATTTTCAGGA CGCCACACAA AAATGAAAAT CACCGCCGCA ATGCTGCTGT GCGCCGTTCT GATGGCCCTC ACCTGGGTCG GCTGGGAAAC AATTGACAAT CGCTTCAGCA CCATCTATGC GGCAGATGAT ATCATGCGCA TTGGCCGGCT CCGATACTGG GGCAGATGCC TGGCCGGCGG GCTGGATTTT TTGACCACCG GTGTTGGTTT TGGTGCCTTT GAAGTGGCCG GACCCATCTA CCAGACCTAC TATATGGGAG CCATCCTGGA CCATGCCCAC AACGACTACC TGGAGCTGCT TATAGAAGGC GGTATCCCCG GTGTTCTGCT GTTTCTTGTT TTTTTTCTCT GCCTTTTCCA GGTTGTGCAG AAAACCCTAA AAAAGAGAAA AGAGTCCTAT TCCATTCTGG TCTGTATCGG CGCCATTACC GGTATTGTAG CCATCCTGCT GCACAGCTTC ACAGACTTCA ACCTGCATAT TCCCGCCAAC GCCCTTTATC TTGCCTTTCT CTGCGGCCTG GCGGTTGCCG CGGCCCACAC CCGGCTGCGA AACCACATCA CCCCGCCCAC CTACCTGCCA CCCGCGCCAA ACAGGGCAGC CCTTGTCACG CCTTTTCTGT TTATCCTGCT CTGGCCGCCG CTTCTGGCGC TGTCTATGGG CCAATGGATG GCCGATCAAC ACATCCAGCC CTTTATAAAG GCCCCCCTGA ACAACACCAC TGCCCCGGCC CTGCTGGAAC AGGCTGCCGA AAGCGCCCGC CGTGCCACCG CCTTCTCACC ATGGAGCGCA ACCGCCCACA CACTTCTCGG AGACGCCGCC TTTTTCTCCG GCAACCCGGA ACAGGCACTG GACGCCTATC AGCAGGCCCT CTGTTTTACA CCCACCCGAT CAACACTGCT TCAAAAGGCC GGCCAGGCCG CCCGCAATGC CGGCCTGCCC CTTTCCCGGG CCGAGGCCCT TATGGCCGCC GGTGTAAAAA CCTATCCCAT GCGACCCGGC GCGCATGGCG CCCACGCCGG GTTCCTGTTT GAAACCGGCA ATAAGGAAAA GGCCATGTCC GTGGTTCGAA CTGGTATTAA AACCCATCCT TCCCTGGCGC GACAGTTTTT TACCCTGATG ACTTATGCCG GCCTCACCCC CGCGGAAATG TTTACAGCCC TGCCTGCAAA TTCTTATGTG CTGACCCAGT TTGCCGCCCA TATCCAAAAC ACCGATTACG ACTTTATGCG AAGAACCATT CTGACCGCCG CCGTGAATGC CGCCGACCAG GAAGCCGAGC CCTCGCCAAA GGCTTATATT AACCTGGCCC ATCTTTACCT GCGGGAAAAA AATCATGACC AGACCATTAC TGTTCTGGAA CGTGGTGTCA CCCGATTGCC GGATCACCCC TATCTGCTTT ACCTGCTGGC CCGGACTTAT GAAGAAAACC AGATAGTCTA CAAGGCCCTG GATCTGTATA AAAAGCTCCA GATTATTTCC CCCGGCTACC GCGACACCGA ACAACGTCTT AAAGCCATGA AACGGTAA
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Protein sequence | MLSISRFLYL ATLVFAPLAF GSVESWAFFF LTLLTGAAIS FYLLHTRRHA APIYRVPCML PLALLGLFIF LQIIPLPQAV LSLLSPNAAQ LRNETIGILL PDRAWPLTLN LHATLFELCR WLLWVGFYWI SVQLLSDKAM LRRTLLFLAF FAGIFAFSSI LQHIFTDNRA LWFRYISVQS CSIFGSYINR NHYAGLMAML FGPTLGLLLA LRPPRQFGTM REKILGLFEE KETPLFILLL LSASIMVMSV FISLSRGGMT SLCISSLFFI LMASGKKFSG RHTKMKITAA MLLCAVLMAL TWVGWETIDN RFSTIYAADD IMRIGRLRYW GRCLAGGLDF LTTGVGFGAF EVAGPIYQTY YMGAILDHAH NDYLELLIEG GIPGVLLFLV FFLCLFQVVQ KTLKKRKESY SILVCIGAIT GIVAILLHSF TDFNLHIPAN ALYLAFLCGL AVAAAHTRLR NHITPPTYLP PAPNRAALVT PFLFILLWPP LLALSMGQWM ADQHIQPFIK APLNNTTAPA LLEQAAESAR RATAFSPWSA TAHTLLGDAA FFSGNPEQAL DAYQQALCFT PTRSTLLQKA GQAARNAGLP LSRAEALMAA GVKTYPMRPG AHGAHAGFLF ETGNKEKAMS VVRTGIKTHP SLARQFFTLM TYAGLTPAEM FTALPANSYV LTQFAAHIQN TDYDFMRRTI LTAAVNAADQ EAEPSPKAYI NLAHLYLREK NHDQTITVLE RGVTRLPDHP YLLYLLARTY EENQIVYKAL DLYKKLQIIS PGYRDTEQRL KAMKR
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