| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1787 |
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| Symbol | |
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| ID | 5694627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2153988 |
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| End bp | 2157986 |
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| Gene Length | 3999 bp |
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| Protein Length | 1332 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641264385 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001529668 |
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| Protein GI | 158521798 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG ATCGAAAAAA CCGTTTTACC GTGTTTGTTC TTTCTTCATT TCTTTGTTTG
TTTTTACTTT TAACACCCAT TATTGCCGGC GCCACGATCA TCTATGTGGA TAAAGATGCC
ACCGGCGCCG GCACCGGAAC ATCGTGGGGC AATGCCTGCC CCGAACTCGG TGATGCCCTG
TATGCCGCCG TTAGCGGCGA CGAAATATGG GTGGCGGCAG GCACATATTA TCCGACCCGG
GACAGGTACG GCAGCGCCGC GCCTGCCGAC AACCGCGATA AAACCTTCTA TTTTTCTCCC
TCAAACAGCC TGAAGGTCTA CGGCGGGTTT GACGGCACAA ACGGCGGCGG CGGCGGTGCC
CTGGAAACAG ACCTCTCCCA GCGGAATCCG GCCGCCAATG TGACCATCCT CAGCGGCGAC
CTGGCCGGCG ATGACGACAG CGGTGGGAAC AACAGCGAGA ACGCCTATCA TGTAGTGTTT
ATGCAAGCCA ACACCGCCGA GGTCCTGCTG GACGGTTTTA CCGTTACCGC CGGCAACGCC
GACGCCGCTT CCGCCAGCGA CAGTTATGGC GGGGGAATTT ATAACAGCGG CGCCAACGGC
ACCGTTAATC CGGAAGTGAA AAACTGTATT ATCCGGGGCA ATCACGGTAA GTATGGCGGC
GGCTTGGCTA ACTGGGGATC GAGCGTGAAC AATGTGGTCA ATGCGTTTTC CCTGACTGAT
TGTGATATCC GGGAGAACAC GGCCATGTTC GGTGGCGCCC TGTATATGAC AAATAGCGAG
GTAGCAATGC TGACCAATTG TCTGCTTCGC GGCAACAGCG CCACTGATAA CGGCGGGGCG
ATTGCCAGCT ACTCGAGTCT GGCCATCCTG GCCAATTGCC TGGTTACCGG CAATACCGCG
GAAAATGGCG GTGGCTTTTA CACCGGTAAC GATGATAATG TCACCAATCG TCCCTACCGG
ATCCGCAACT GTACTATCAG CGGCAATTAC GCTTCCAATC TGGGCGGGGC CATGTACAAT
TTGGCGGACA CGGACTTCCA CTGTAATTCG AACCTGGCCA ACACCATTAT CTGGAACAAT
GACAGCGGTA ACTCGCTGAA GGATATATAC AATGAAGGAG ACGCTGAGCC CGTGTATCAG
AATTGTGATA TCGGCGGCTG CGAAGGCAGC GGCGCCTCCT GGGATACCGA ACTGGGTATT
GACAACGGCG GCAATATTGA CGCCAATCCC CAGTTTTTTG CGCCGGTCTC GCCGGCGTCG
GCGCCCACCA CGGCCGGCGA CTTTCATATC GCGCTGACCT CCGCCTGCAT CGACGCCGGC
ACCGATACCA TCCTGAACTT CTCTCTTTCG TATATCCCGG AGGATGACAT GGACAAGGAA
ATCCGGGACG ATGTGAATGA CATCGGCGTG GACGAGGCCC TGGACACGGA TGGAGACGGA
ACGCGAAACC TGGACGACGC CGACGATGAC AACGACAGCA TCCCCGATGT GGATGAAATA
GCGATCGGCA CCGATCCGCT CCTGGCCGAC ACGGACGATG ACGGCCTTGA CGATTATGAA
GAAGTCTACA CCTATCCGAC CGATCCTTTG GACCCGGATT CGGATAATGA CGGCATGACC
GATGGTTGGG AAGTGGCCAA CGGTCTCGAT CCGATGGATG ACACAGACGC TGCCGAACAC
TGGGACAGCG ACACCCTGGA CAATTTAACC GAATTCCAGT ACGGCACAGA TCCGAACGAT
CCGGATACGG ACGGTGACGG CATGCCCGAT GACTGGGAAG TGGCCAATGC CCTTGATCCC
CTGACGGATG ACACCGGCCT GGATCCCGAC TTTGACCGCA TTACCAACCT GGCTGAGTAC
GATACCGGTA CCGATCCGCA GGTCTATCAT ATCTACACCA ACGCCATTTA TGTCAATCAA
GCTGCTGCCG GTTTAGACAA CGGCATCTCC TGGGCCAACG CCTTTGTCTC GCTCCAGGAC
GCGCTGGCCG CAGCCGGAAC CGTCTCCGGT GGGGCCGACA TCTGGGTGGC GACCGGAACC
TATTACCCGG ATGAAGGGGG CGTTCAGACC AACGGGGATC GCAACGCAAC CTTCAGGGTA
CTCGACGGCA TGGCGGTTTA CGGCGGTTTT GCGGGAACAG AGTCCAGCCT TGACCAACGG
GCCCTGTCGG TAGAAGTTTT ATCCGTCCTG GACGGGGATC TGGACCAGAA TGACAACAAC
GGCGGCGACA ACAGCGAAAA TGCCTATCAC GTGGTTCACT TCAGCGGTGT AAGCGACCAG
ACCATCCTGG ATGGGTTTGT TATTACCGGT GGCAATGCAA ACAGCACCCA ATCCAGCACC
GATAAAGATG GCGGCGGTAT TTATAGCGCC GACGGTACGC CGCGTGTATC CAACTGTCAT
ATTACAGGCA ACTGTGCCAC ATGGGATGGC GGAGGCCTCT ATATTAACAA AGGCAACCTT
CAAATTTTCA ACTGCGCCAT TACCGAAAAC ACCGCGGGTT ATAACGGCGG CGGCATGTGT
AATTATACAT ACGCCTTGAC GCTTGACCCC GTAATAGAGT GTTCCCCGAT TGTAATGAAC
AGTGTGTTTG CGGGCAACTT CGCGGGCCAT GACGGCGGCG CAATGTATAA CCATGCCTAT
GGCGGAACCG TCAGCCCCAC AATTACCAAC TGCACCTTCA CAGGCAACAA CGCCGCCAAC
GCGGGCAATG AAATTTATAA TTATATTCTG ACCATACTGG GTGTGCAACT CGGTGTCTGC
GAACCACAGT TTACCAACTG CATTCTCTGG AACGATTCAG CGATTTTCAA CTTTATCGCC
ACGCCCTCCT ATGCCTACTG CAACATCAAG GGCAGCGGCG GCAGCGCGTC ATGGGACAGC
ACCCTGGGCA CGGACAACGG CAACAACATA GACGCCGATC CCATGTTTGC AAACCCGGCC
GCCGCCGACC TGCGCCTTTT GGCCGGTTCG CCCTGCCTGG ACACCGGCAA CAATGTTGCC
AACGGCACGT CGTTTGACCT GGATGGCGAA GCCCGTATTC AGAACAACAT CATTGACATG
GGGGCCTACG AAGGAGCCGA AGCCCTGCCC TTTGCCAACC TGATCAACTG GAACGGCAAC
CTGGTGGCCG ACTTTGGCGA CAATGGCCTG TGGTACCACA ACGGCACAAG TTGGAACTGG
ATGACCAACC GGGGCCATGT CAATCAGATG GTGGCCTGGG ACGGCAAGCT GGTGGTAGAC
TTCGGCTCGG ACTACGGCCT GCACTACTAT GACGGCACCG GCTGGGCCTG GATGTCCAAC
AAAGGCGATG TGGCAAAAAT GGTCGCCTGG AACAATGGCG CAACAGAAAA GCTGGTGGTG
GACTTTGGCG CAGGCAAGCG TGTCTACACC TATAACGGTT CCTGGAGCTG GTTTACCAAC
AAGGATGCCG TGGCAAACAT GACCGTATGG GATAACCGGC TGGTGGTCGA CTTCGGTTCC
GGCCGGGGCG TGTACAATAA CAACGGCACC TGGAACTGGA TGAGCAACAA GGACGATATC
GCCAGAATGG TGGCCTGGAA CAACGGTTCT GCCGAGCGAC TGGTGGTGGA TTTTGGCGGC
GGCCGCCGGG TGTACACCTA CAACGGCGCA TGGAGCTGGC TCACCAACAA GGATGATCTC
AACGACATGG CCGTGTGGAA CAACAAGCTG GTGGTCGACT TTGGTTCCGG CCGCCGCATG
TACACCTATG ACGGGGCCTG GAGCTGGATT TCTAACAAAG ACGATGTGGT GAAAATGGTG
GCCTGGAACG ACGGTACCGA CAAACTGGCC GTGGACTTAG GGGCCGGACG GGGCATGTAC
TATTATGACG GCGCCTGGCA CTGGATGAAA AACGCCGACA CCGTGCCGGA GCTGACGGCC
TGGGGCAACC GCCTGGCCGT GGACTTCGGC TCCGGCGTGG GCGTCTATAA CTACAACGGC
GCCTGGAACT TCATGAAATC CTGGAGTACG GCGGACTGA
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| Protein sequence | MKKDRKNRFT VFVLSSFLCL FLLLTPIIAG ATIIYVDKDA TGAGTGTSWG NACPELGDAL
YAAVSGDEIW VAAGTYYPTR DRYGSAAPAD NRDKTFYFSP SNSLKVYGGF DGTNGGGGGA
LETDLSQRNP AANVTILSGD LAGDDDSGGN NSENAYHVVF MQANTAEVLL DGFTVTAGNA
DAASASDSYG GGIYNSGANG TVNPEVKNCI IRGNHGKYGG GLANWGSSVN NVVNAFSLTD
CDIRENTAMF GGALYMTNSE VAMLTNCLLR GNSATDNGGA IASYSSLAIL ANCLVTGNTA
ENGGGFYTGN DDNVTNRPYR IRNCTISGNY ASNLGGAMYN LADTDFHCNS NLANTIIWNN
DSGNSLKDIY NEGDAEPVYQ NCDIGGCEGS GASWDTELGI DNGGNIDANP QFFAPVSPAS
APTTAGDFHI ALTSACIDAG TDTILNFSLS YIPEDDMDKE IRDDVNDIGV DEALDTDGDG
TRNLDDADDD NDSIPDVDEI AIGTDPLLAD TDDDGLDDYE EVYTYPTDPL DPDSDNDGMT
DGWEVANGLD PMDDTDAAEH WDSDTLDNLT EFQYGTDPND PDTDGDGMPD DWEVANALDP
LTDDTGLDPD FDRITNLAEY DTGTDPQVYH IYTNAIYVNQ AAAGLDNGIS WANAFVSLQD
ALAAAGTVSG GADIWVATGT YYPDEGGVQT NGDRNATFRV LDGMAVYGGF AGTESSLDQR
ALSVEVLSVL DGDLDQNDNN GGDNSENAYH VVHFSGVSDQ TILDGFVITG GNANSTQSST
DKDGGGIYSA DGTPRVSNCH ITGNCATWDG GGLYINKGNL QIFNCAITEN TAGYNGGGMC
NYTYALTLDP VIECSPIVMN SVFAGNFAGH DGGAMYNHAY GGTVSPTITN CTFTGNNAAN
AGNEIYNYIL TILGVQLGVC EPQFTNCILW NDSAIFNFIA TPSYAYCNIK GSGGSASWDS
TLGTDNGNNI DADPMFANPA AADLRLLAGS PCLDTGNNVA NGTSFDLDGE ARIQNNIIDM
GAYEGAEALP FANLINWNGN LVADFGDNGL WYHNGTSWNW MTNRGHVNQM VAWDGKLVVD
FGSDYGLHYY DGTGWAWMSN KGDVAKMVAW NNGATEKLVV DFGAGKRVYT YNGSWSWFTN
KDAVANMTVW DNRLVVDFGS GRGVYNNNGT WNWMSNKDDI ARMVAWNNGS AERLVVDFGG
GRRVYTYNGA WSWLTNKDDL NDMAVWNNKL VVDFGSGRRM YTYDGAWSWI SNKDDVVKMV
AWNDGTDKLA VDLGAGRGMY YYDGAWHWMK NADTVPELTA WGNRLAVDFG SGVGVYNYNG
AWNFMKSWST AD
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