Gene Dole_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1777 
Symbol 
ID5694616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2142240 
End bp2143637 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content60% 
IMG OID641264374 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001529658 
Protein GI158521788 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGG TTGATGAGCC GAAAAAAAAC GTGCTGGTCG TGGATGACGA AGAGAACATG 
CGCCACATGC TGGCCGCCAT GCTCACGCGG GAGGGCTACC AGGTTGAGAC CGCGGCAAAC
GGGGCACAGG CACTGGAGAT GGTTGCAAAG CAGCCCTTTG ACTTTATCCT GTGCGACATC
AAGATGCCCC GCATGGACGG GCTTGCCTTT CTGGCCCATC GGACCGAGCA CTTTCCCGAT
GCCACAGTCA TCATGATGTC AGCCTACGGC ACCATCGACA CCGCGGTGGA GGCACTGAAG
CACGGGGCCT ACGACTATAT ATCCAAACCC TTCAAGTCCG ACGAGGTGCT GCTGGCCTTG
AAAAAAGCGT CGGAACGGGA ACGGCTGAAA CGGGAAAACA TTGCCCTGCG ACAACAGATC
GCCACCCTTG GCCGGGGTTA CACCTTTGGC AAGATCATTG CCAAAAGCAA GGCCATGCAG
GCCGTTACCG ACCTGATCAC CAAGGTGGCG GCCCACGACA CCACCGTGCT GGTCACCGGC
GAATCCGGTA CCGGAAAAGA GCTGGTGGCC CGCAGCCTTC ATTTCAACAG CCCCAGGGCA
CCCAACGCGC TGATCCCGGT CAACTGCGGC GGCATACCGG AAAACCTGCT GGAAAGCGAA
CTGTTCGGCC ATGTGAAAGG GGCCTTTACC GGGGCGGACA AAAACAAGAC CGGCCTGTGC
GAAATCGCCC ACAAGGGCAC CCTCTTTCTC GACGAAATCG GGGAGCTGCC CGCCTCTTTG
CAGGTCAAGC TGCTGCGCCT GCTTCAGGAC AGGGAGATCC GGCCGGTGGG GGCGTCAGCC
ACCCGGACCA TTGACATCCG TATCGTGGCC GCCACAGCCA GAAACCTGGA GGCCGACGTG
GCCGAAGGTG TCTTTCGCGA AGATTTGTTC TACCGGCTCA ACGTGCTCCA TATTCATCTG
CCGCCCCTGC GCGACCGCCA GGAGGACATT CCCCTGCTGA TAGAGACATT TGTCCAGGAG
TTTAATAAAA AGCTGGATAA AACGATCACC GGCCTGGCGC CGGCGGCCCT CTCCCGCCTG
TTGGCCCACA CCTGGCCGGG CAATGTGCGG GAGCTTGAAA ACCTCATCGA GCGGGCCGTG
GTCCTGGCCG AGGGCGACAC CATCACACCG GACGACCTGC CCCCTGGTTT CGGCACGGAT
TCTGCCGGCG GGCCGGGCGA CGCCCTGGCC GGATTTGACG GTTATTCCAT CAAGGCGGCC
CAGAAAATCT TTGAAAAGCG GCTGATTGAA AAGGCCCTTG CCAAAACCGG CGGCAATCGC
ACCCGGACCT CAAAGCTGCT GGAGATCAGC CACCCCTCCC TGCTGGCCAA AATGAAAGAG
TATGGCATTG AAGGGTAA
 
Protein sequence
MKPVDEPKKN VLVVDDEENM RHMLAAMLTR EGYQVETAAN GAQALEMVAK QPFDFILCDI 
KMPRMDGLAF LAHRTEHFPD ATVIMMSAYG TIDTAVEALK HGAYDYISKP FKSDEVLLAL
KKASERERLK RENIALRQQI ATLGRGYTFG KIIAKSKAMQ AVTDLITKVA AHDTTVLVTG
ESGTGKELVA RSLHFNSPRA PNALIPVNCG GIPENLLESE LFGHVKGAFT GADKNKTGLC
EIAHKGTLFL DEIGELPASL QVKLLRLLQD REIRPVGASA TRTIDIRIVA ATARNLEADV
AEGVFREDLF YRLNVLHIHL PPLRDRQEDI PLLIETFVQE FNKKLDKTIT GLAPAALSRL
LAHTWPGNVR ELENLIERAV VLAEGDTITP DDLPPGFGTD SAGGPGDALA GFDGYSIKAA
QKIFEKRLIE KALAKTGGNR TRTSKLLEIS HPSLLAKMKE YGIEG