| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1770 |
|---|
| Symbol | |
|---|
| ID | 5694609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2132668 |
|---|
| End bp | 2133639 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641264367 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001529651 |
|---|
| Protein GI | 158521781 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00973065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGC TGTATCGGAC CGGGGGAGGG CTGATTGCCG GTGTTCTGGT GTTGCTGATG
GTGTCCGGCT GTTCCATGCT GGGGATTAAA AATATTCCAG TTGAAAAGCT GGAAAAAAAA
TATTTCAACG AACATTCCCA AATGCTGGAA TTTCAGGGCC TGAAGATCCA TTACCGGGAC
GAGGGCCAGG GCCCGGTGCT GATTCTGATC CATGGCGTGT GCGCCTCCCT GCATACATGG
GATGGGTGGG TGGAAGAATT AAAGGACCAC TACCGCATCA TTCGCGTGGA CCTGCCGGGG
TTCGGCCTGT CACCGCTGAC CGACAAGAAT ATCTATGAGC GTCAACGGGC TGTCGCAGTC
ATCGAAGAGA TGGTCAAGAC CATGGGGCTG GATCGGTTTT CCATTGCCGG TAACTCCCTG
GGCGGCCATG TGGCCTGGAT CTACACCCAT GCCCATCCGG AGCGGGTGGA AAAACTTATC
CTGATCGATT CGGCCGGTTT TCAGATGAAG ATGCCCTGGA TACTGAAGTT TGCCTCCACA
TGGCCGGTTT CCATGGTTTC CCGTCGCATG ATGCCCAAGG TGATCCTTTA CGAGGCGGTC
AACCAGGTCT ACGGCGATCC CAGGCGCATG GAAAAAGGAA CCAGGGAACG CTATTTTGAG
CTGGCCATGC GAAAAGGGGC CAAAAGCGAT TATGTGGATA TTTTTAAAAA GCTTGATCAT
GAACTTTCAA AACGGAGCGT GTCCGACGGG ATTGACGAAA TCAGCGTTCC CACCCTGGTG
ATGTGGGGGG ACAAAGACAC CTGGATTCCC TATGCCGAGT CCATTGCCAG GTGGCGCCAT
GCGCTTCCGG ATGCCCGGTT TATTGTCTAT GCGGGTGCGG GCCACGTGCC AATGGAGGAG
ATTCCGGTGG AAACCGCCAG GGACGCACGC GCGTTTCTTT CCGGCAGAAT AACCGGCGCG
AGAGCCGACT GA
|
|---|
| Protein sequence | MKGLYRTGGG LIAGVLVLLM VSGCSMLGIK NIPVEKLEKK YFNEHSQMLE FQGLKIHYRD
EGQGPVLILI HGVCASLHTW DGWVEELKDH YRIIRVDLPG FGLSPLTDKN IYERQRAVAV
IEEMVKTMGL DRFSIAGNSL GGHVAWIYTH AHPERVEKLI LIDSAGFQMK MPWILKFAST
WPVSMVSRRM MPKVILYEAV NQVYGDPRRM EKGTRERYFE LAMRKGAKSD YVDIFKKLDH
ELSKRSVSDG IDEISVPTLV MWGDKDTWIP YAESIARWRH ALPDARFIVY AGAGHVPMEE
IPVETARDAR AFLSGRITGA RAD
|
|---|
| |