| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1764 |
|---|
| Symbol | miaA |
|---|
| ID | 5694603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2125422 |
|---|
| End bp | 2126366 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641264361 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_001529645 |
|---|
| Protein GI | 158521775 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCG GATGCCCGAC ACGACCCAGA GTGATTGTGC TGTGCGGCCC CACCGGTGTG
GGCAAGACCC GCCTTGCTAT CGCCCTTGCC GAGGAGTTCG GCGGCCAGAT CGTGGGGGCC
GATTCCATGC AGGTTTACCG GTACATGGAC ATCGGCACGG CCAAGCCCAC CCCGGCCGAA
CAGGCCCGGG TGCCCCATCA CATGATTGAC GTGGCAGACC CGGATGAGTC CTTCAGCGCG
GGCCGGTATG CGCGGATGGC CCGGCCCATT CTTATGGATT TGAACGAACA GGGCGTACTG
CCTGTACTTG CCGGCGGCAC CGGCCTTTAC ATCAAGGCCT GCCTGCATGG GTTGTTTCGC
AAGCACTCGG CGGACAAAGC TGTTCTGGAA AGGCTTGAAA GGGAGGCAAA CGATCAGGGG
TCGGCGGTCC TGCATCAGCG GCTTGCCGTC TGTGATCCGG AAACCGCGGA ACGCATTCAC
CCCAACGATC GGTTCCGCAT TGTCCGGGCA CTTGAGGTGT TTGAGTCCAC CGGGCTGCCG
GCCTCCGGCC ACCGGCAGGC CCACGGCTTT GCCGAAGACC CCTTTGACGC GCTGAAGATC
TGCCTGCACC TGGACAGAAA GACGCTTTAT GGGCGCATCA ACCACCGCGT GGATCTCATG
CTGGCCGACG GGTTTGAAAA GGAGGTGGCC GGCCTGCTGG CCAGGGGATA TGCGCCGGAG
TTGAAGGCCA TGCAGTCCAT CGGGTATCGC CACATGACCG CATGGCTGGC CGGCGGCATC
TCCCGTGAAA CAGCGGTGGA AAACATGAAG AAAGACACCC GGCGATACGC CAAACGGCAG
GAGACCTGGT TTAAGGCCGA CCCGGACATG GTGTGGGTCG ACCAAAAAGA GGGTTTAGAA
AAAGTGCCTT TTCTGGTAAA GAGGTTTCTG CGTTATGGTA AATAA
|
|---|
| Protein sequence | MTGGCPTRPR VIVLCGPTGV GKTRLAIALA EEFGGQIVGA DSMQVYRYMD IGTAKPTPAE
QARVPHHMID VADPDESFSA GRYARMARPI LMDLNEQGVL PVLAGGTGLY IKACLHGLFR
KHSADKAVLE RLEREANDQG SAVLHQRLAV CDPETAERIH PNDRFRIVRA LEVFESTGLP
ASGHRQAHGF AEDPFDALKI CLHLDRKTLY GRINHRVDLM LADGFEKEVA GLLARGYAPE
LKAMQSIGYR HMTAWLAGGI SRETAVENMK KDTRRYAKRQ ETWFKADPDM VWVDQKEGLE
KVPFLVKRFL RYGK
|
|---|
| |