Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1750 |
Symbol | |
ID | 5694589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2101153 |
End bp | 2102229 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641264347 |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_001529631 |
Protein GI | 158521761 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0112928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTGA TGAACCCCTT GAACCCTTGG CCCCTTGAAT CCTCGAACCC TTTGATTGCC GTTCTTGTCA GCGGCGGAAT AGATTCTCTG GTGGCGGCCC ACCTGCTGAA ACAGTCCGGG GCTGACGTGA CGGCCATCCA TTTTCTCACC GGGTATGAAC CGGAAGACCG GGCAGGACGG CTTGAAAAGC TGTTTACGCA AATGGATATT CCGGTTTTCA TTTTTGACTG CCGGACCGTG TTTCAATCCA ATGTGGTGGA CTATTTTACC GCTGCCTACC TTCGCGGTGA AACACCCAAT CCCTGCATGG TGTGCAACAG CCGCATCAAG TTTGGGGCCT GCATGGACTA CGCCCGTTCC CTGGGCGCCG ATGCCGTTGC CACGGGCCAT TACTGCCGGA CAACCAAAGA CCCGGACGGT GTGCGGCTCT GGAAAGGGGC GGACCCGGCA AAGGAGCAGA GCTATTTTCT TGCCTTTCTG TCCCAGGATC AGCTTGGCCG GGCCCGGTTT CCCCTGGAGC GGATGACAAA GGACCAGGTG CGGGCCCACG CGGCCCGGCA CGGTCTTGTT CCCATTGAGA GCAAAGAAAG CCAGGATGTC TGTTTTATCA GGGGCGAAGA ATGCGCCGAT TTTATAGAGG CCCAGGTTCC GGCCATCCCG GGCCCGGGCC CGATTGAAGA CATGACGGGC CGGTTGATCG GCACCCATTC CGGGCTGCAC CGGTTTACCG TGGGCCAGCG CAGGGGAATC AACTGCCCGG CTGAACAGCC CTACTATGTG GCGGCCCTGG ACATGGCGCG CAACTGCCTG AAGGTGGGGT TCCGGCAGGA CCTGTTTGTC CCGGTCTGCC GGGTGGCGCA GGTAAACTGG ATTCCGGACA GGCCGAAAGG TTCCATGAAC GTGTCTGTAA AGATCCGGTA CAATCAGACA GAAGTGCCGG CCCGGCTGAC GGCCCTGGGC GAAACAGACG CGGTTGTTGA GTTTGTCACG CCCCAGTTTG CCGTGGCCCC GGGCCAGGGA GCGGTTTTTT ATGACGGGGA CGCTGTTCTC GGCGGGGGTA TTATCAGGGC GGAATGA
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Protein sequence | MPLMNPLNPW PLESSNPLIA VLVSGGIDSL VAAHLLKQSG ADVTAIHFLT GYEPEDRAGR LEKLFTQMDI PVFIFDCRTV FQSNVVDYFT AAYLRGETPN PCMVCNSRIK FGACMDYARS LGADAVATGH YCRTTKDPDG VRLWKGADPA KEQSYFLAFL SQDQLGRARF PLERMTKDQV RAHAARHGLV PIESKESQDV CFIRGEECAD FIEAQVPAIP GPGPIEDMTG RLIGTHSGLH RFTVGQRRGI NCPAEQPYYV AALDMARNCL KVGFRQDLFV PVCRVAQVNW IPDRPKGSMN VSVKIRYNQT EVPARLTALG ETDAVVEFVT PQFAVAPGQG AVFYDGDAVL GGGIIRAE
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