Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1739 |
Symbol | |
ID | 5694578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2089047 |
End bp | 2090006 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264336 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_001529620 |
Protein GI | 158521750 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000870898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTTGC CGGGATGCAG CCTGCCCGGC CTCAAACTGC CGGCCGATGC CACTGACCCG CTGCGGGAGT TCGTACTGGA GGGCTCAGGC CCCCAGAAAA TCGCCATGGT TTCAGTCAAC GGCGCCATTA CAGATAAGCC CACCAGGGAT TTCATGTCCC GCAACCATCC GGGCATGCTG GACGAATTCG TGGCCCAGCT GGCACTGGCA AAAGAGGACC CATCCATCAA AGCCCTGGTG CTGAAGGTCA ATTCGCCGGG CGGCACCATC ACGGCCAGCG ACATCATGTA CAAGGAGTTG ATGGATTTCA AACAGCAGAC CGGCAAACCC GTTGTGGCGG CCCTGATGGA TGTGGCAGCC TCCGGCGGTT ATTACATCTC CCTGCCGGCG GACCACATCC TGGCCCATCC CACCACGCTT ACCGGGTCAG TGGGCGTGAT TTTTGTCACG CCACGGGTCA GCGGTTTGAT GGACAAGCTG GGGCTGGACA TGAAAATCCG CAAATCGGGC AAGCACAAGG ACATGGGCTC CCCTTTCCGG GATACCACGG CGGAGGAGGA CGCTCTGTTT GACGGTATCA TCGACGACAT GGCCGGGCGG TTTGCCGGGC TGGTGGAGAA GCACCGGGCC GATCAGAAGC CAGACATGGA AAAAATCAAA ACAGCCCGCA TCTTTACGGC TGACGACGCC CTTTCCGCCG GCCTGGTTGA CCAGGTCGGC TATCTTGAAG ACGCCCTGGC CCAGGCAAAA AAGATGGCCG GGCTGCCGGA CAACGCGGCC GTGGTGACCT ATCGCCGGAC CTACTATCCC AACGACACCA TCTACAATAC CCTGGTGACA CAATACGGGG CCCATTCCGG GGCACTGGTC AACATTGATC TGCTGGAGAG CATGCCCGCG CTTAAGCCGG GCCTGTACTA CCTGTGGTGG CCCGGCGCCG GGAACAGCGT GCAGCCCTGA
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Protein sequence | MVLPGCSLPG LKLPADATDP LREFVLEGSG PQKIAMVSVN GAITDKPTRD FMSRNHPGML DEFVAQLALA KEDPSIKALV LKVNSPGGTI TASDIMYKEL MDFKQQTGKP VVAALMDVAA SGGYYISLPA DHILAHPTTL TGSVGVIFVT PRVSGLMDKL GLDMKIRKSG KHKDMGSPFR DTTAEEDALF DGIIDDMAGR FAGLVEKHRA DQKPDMEKIK TARIFTADDA LSAGLVDQVG YLEDALAQAK KMAGLPDNAA VVTYRRTYYP NDTIYNTLVT QYGAHSGALV NIDLLESMPA LKPGLYYLWW PGAGNSVQP
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