| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1685 |
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| Symbol | |
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| ID | 5694522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2015072 |
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| End bp | 2016346 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641264280 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_001529566 |
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| Protein GI | 158521696 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000455282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAG AAAAACCGAA CCCTCCTGCA ACAGATGAGA GTGCCCCGCT CCGGGTCGAC
ACCCTGCCCC ACGCAAAGGC CCTCCGGTGG CCCATGACCT GGTATTTTCT CACGGGCAAA
TTATACAGCC TGCTGCCGTG GAAAAAAACG GCCTGGACCT GCGCCGGGTT TCCCATCGAG
CTTTTGCTGG GGCTCGATAT CTTTCCCCTG CATCCGGAAA ACATGGCCAC CGTGGCCGCG
GCCCAGAAGC AGTCCCGCCG GCTGATCGAA CATGCCGAAA GCATGGGCTA CTCCCGGGAC
TTGTGCTCCT ACTGTAAAAC CAACATCGGC GCGGTGGATA CACAGGCGCC CTTAAAACAC
GGCGGCATCG CCCGGCCGGA TATCATCACC TGCACCAACA CCATCTGCGA CACTCACTGG
AAATGGTTCC AGGTCCAGGC GGAAAAGCTG GACGTTCCCC TGTTCGTGTT CGACTGTCCC
AAGATCGTCA GCGGCACGGA CGAGCGCACC ATCGAGGGGT ACGTGACCTA CCTGGTGGAA
CAGTTCTATG AATTTTTCGA TTTTGTCAAA AAGCACACGG GGAAAGAACC GAACATCGAC
CGGATGGTCC GGGCGGCGGA AAAGTCCGAA CAGTTGAGCG TCCTGTGGCG GGATATATAC
GAGTACCGCA AACGCGTGCC CACACCCTAC AGCATGGCCG AGACGTCCGC CTCGTTTTTT
CCCCTGGTGG TCATGCCCGG GGCACGTTCC GGCATCAAAT TCTTTGAGAA GATCCTGACC
GATATCCGGC AGCGGGCCGA GCAGGGCAAA GGCACCTTGA CAGGGAAGGA GCGCTACCGG
CTGATGTTTG AAGGGATTCC CTTCTGGTAC CGAATGCGGT TCATGTACGA TCTGGCCCGG
TACGGCGCCG TTGTGGTTTA TGAGCCCTAC ACCTTTTCCT TTGCCCCACC CAAACCTGTG
AGCATGGGAT ACGCCGAGAC GCTGCGACAT GTGGCACGGG CCATGATGGA CGTGCCTTAC
ACCTACAATC TTGAAAAGCG GATTAGCTAC TTCAAACAGG CCATCCAGGA ATACCGCATC
GACGGTGTGA TCCTGCACGA AAATCTGTCG TGCCGGCCGT CGAGCACCGG CATGATCGAC
CTGAAAAACG CCATTCAGCA GGAATGCGAC ATACCGGTGC TGATCATTCA GTGCGACATG
AACGACCCCA GGGCCTTTTC CGAAGAGCAG ATCAAGACCC GTGTCGAAGG CTTTATCGAG
CTGATGGATA AATAA
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| Protein sequence | MNAEKPNPPA TDESAPLRVD TLPHAKALRW PMTWYFLTGK LYSLLPWKKT AWTCAGFPIE
LLLGLDIFPL HPENMATVAA AQKQSRRLIE HAESMGYSRD LCSYCKTNIG AVDTQAPLKH
GGIARPDIIT CTNTICDTHW KWFQVQAEKL DVPLFVFDCP KIVSGTDERT IEGYVTYLVE
QFYEFFDFVK KHTGKEPNID RMVRAAEKSE QLSVLWRDIY EYRKRVPTPY SMAETSASFF
PLVVMPGARS GIKFFEKILT DIRQRAEQGK GTLTGKERYR LMFEGIPFWY RMRFMYDLAR
YGAVVVYEPY TFSFAPPKPV SMGYAETLRH VARAMMDVPY TYNLEKRISY FKQAIQEYRI
DGVILHENLS CRPSSTGMID LKNAIQQECD IPVLIIQCDM NDPRAFSEEQ IKTRVEGFIE
LMDK
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