Gene Dole_1666 details

Gene Information

• Locus tag: Dole_1666
• ID: 5694503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1982046
• End bp: 1982552
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641264261
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001529547
• Protein GI: 158521677
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.155505
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATCG GCACGGGATA CGATCTGCAC CGGCTGGTGA AAGGCCGCAG GCTGGTGCTG 
GGCGGGGTGG CCCTTCCGTT TGAAAAGGGA CTGGACGGCC ATTCAGACGC GGACGTGCTG 
GTGCACGCCG TTTGCGACGC CCTGCTGGGG GCTGCCGGCC TGGGCGACAT CGGGGACCAT 
TTTCCGGATA CCGATGCCCG GTTTAAGGGT GTCTCCAGTC TCCTCTTGCT GACAGAGACG 
GGCCGGATGC TGAAAGAAAA AGGGTTTTTT GTGGTTAACA TCGACGCTAC CGTCCTGGCC 
CAGGCCCCGA AACTGGGAGC CCATAAAGCC GCCATGGCGG CCAATATGGC AACGGCCCTG 
GGCATTGATG CCGCCTGTGT CAATGTCAAG GCCACCACCA CCGAGGGGCT TGATGCCGTG 
GGCCGGGGCG AGGCCATGGC CGCCATGAGC GTGGCCCTGA TTATTGAGGA AGAGGCCAGG 
GATTCGAGGG GCCAGGGGGC CGGGTGA 

 

Protein sequence

MRIGTGYDLH RLVKGRRLVL GGVALPFEKG LDGHSDADVL VHAVCDALLG AAGLGDIGDH 
FPDTDARFKG VSSLLLLTET GRMLKEKGFF VVNIDATVLA QAPKLGAHKA AMAANMATAL 
GIDAACVNVK ATTTEGLDAV GRGEAMAAMS VALIIEEEAR DSRGQGAG