Gene Dole_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1644 
Symbol 
ID5694481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp1952509 
End bp1953141 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID641264239 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001529525 
Protein GI158521655 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCC GCATCGAGAC CATTGTCCGT GGCCTGCTTG AAAACACCGG CGGCAGCCAC 
GACTGGGAAC ACACCCGCCG GGTAGTGGGC TTAAGCCGTA CCATCGGTGC CGCTGAAGGG 
GCTGATATGG AGGTGGTGAT CGCCGCCGCC TTTCTTCATG ACATCGGCAG AAACCACCAG 
GACGGCTCAA ATGGAAAGAT CTGTCACGCG CAAAAGGGCG CGCGCATGGC TGAAGAGATA 
CTAGAGAATT TCCCCTTGCC TGCCGAGCGG AAGGCAAACA TTCTTCACTG TGTGGCGGCC 
CACCGGTTCC GGCGGCCCCC GGAGCCCGAG ACCCTTGAGG CAAAGGTGGT GTTTGACGCG 
GATAAAATCG ACGCCATCGG CGCCGTGGGC GTGGCCCGGG CCTACCTGTT TGCCGGGGAA 
CTGGGCGCGA AACTTCACAA TCCCGACATT GATGTGGAAA AGGCCCCGGC TTATTCAAAG 
GACGACACGG GATTCCGGGA GTACCGGGTG AAGCTTCGGC TGATCAAGGA CCGCATGCTC 
ACCAAAACCG GCAAAAAAAT GGCCGAGGCC CGCCACCGGT TCATGGAGAC CTTTTTTGAG 
CAGTTCCTTA CCGAATACAG CGGTGAGGTT TAA
 
Protein sequence
MLIRIETIVR GLLENTGGSH DWEHTRRVVG LSRTIGAAEG ADMEVVIAAA FLHDIGRNHQ 
DGSNGKICHA QKGARMAEEI LENFPLPAER KANILHCVAA HRFRRPPEPE TLEAKVVFDA 
DKIDAIGAVG VARAYLFAGE LGAKLHNPDI DVEKAPAYSK DDTGFREYRV KLRLIKDRML 
TKTGKKMAEA RHRFMETFFE QFLTEYSGEV