Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1586 |
Symbol | |
ID | 5694423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1889325 |
End bp | 1889810 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264181 |
Product | hypothetical protein |
Protein accession | YP_001529467 |
Protein GI | 158521597 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.3614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAAT CGAAAGGAAA ACAGGCCATG AAATATTCAG AGGCCCGGCA GGGACGAATT TTTGTGCTGC GGCTGGAACA CGGCGAAACC GTTCACCAGG TGGTTGAAAA CTTTGCATCA GACAGGGAAA TAACGGCCGC GGCCCTTATC GCCGTTGGCG GCGCCGATAC AGGCAGCACC CTGGTGGTGG GACCGGAAGA CGGGGGTGCC AGGCCGGTGA CACCCATGGA GCGAATTCTT GACAATGTTT GCGAAATCGC GGGGGTGGGC ACCCTGTTCC CGGATGAGAC AGGCGCCCCC ATGCTGCACA TGCACATGGC CTGCGGCAGG GAAGATAAAA CCACCACGGG GTGTATTCGT AGCGGGGTGG TTACATGGCA GGTGATGGAG ATCGTTCTCA TCGAACTGCT GGACACGCCC GGCCGACGCC TGATGGAGCC GGACCTTGGT TTCAAGCTTC TTGATCCACG GCCAAAGGCT CAGTGA
|
Protein sequence | MTKSKGKQAM KYSEARQGRI FVLRLEHGET VHQVVENFAS DREITAAALI AVGGADTGST LVVGPEDGGA RPVTPMERIL DNVCEIAGVG TLFPDETGAP MLHMHMACGR EDKTTTGCIR SGVVTWQVME IVLIELLDTP GRRLMEPDLG FKLLDPRPKA Q
|
| |