Gene Dole_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1586 
Symbol 
ID5694423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1889325 
End bp1889810 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content58% 
IMG OID641264181 
Producthypothetical protein 
Protein accessionYP_001529467 
Protein GI158521597 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.3614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT CGAAAGGAAA ACAGGCCATG AAATATTCAG AGGCCCGGCA GGGACGAATT 
TTTGTGCTGC GGCTGGAACA CGGCGAAACC GTTCACCAGG TGGTTGAAAA CTTTGCATCA
GACAGGGAAA TAACGGCCGC GGCCCTTATC GCCGTTGGCG GCGCCGATAC AGGCAGCACC
CTGGTGGTGG GACCGGAAGA CGGGGGTGCC AGGCCGGTGA CACCCATGGA GCGAATTCTT
GACAATGTTT GCGAAATCGC GGGGGTGGGC ACCCTGTTCC CGGATGAGAC AGGCGCCCCC
ATGCTGCACA TGCACATGGC CTGCGGCAGG GAAGATAAAA CCACCACGGG GTGTATTCGT
AGCGGGGTGG TTACATGGCA GGTGATGGAG ATCGTTCTCA TCGAACTGCT GGACACGCCC
GGCCGACGCC TGATGGAGCC GGACCTTGGT TTCAAGCTTC TTGATCCACG GCCAAAGGCT
CAGTGA
 
Protein sequence
MTKSKGKQAM KYSEARQGRI FVLRLEHGET VHQVVENFAS DREITAAALI AVGGADTGST 
LVVGPEDGGA RPVTPMERIL DNVCEIAGVG TLFPDETGAP MLHMHMACGR EDKTTTGCIR
SGVVTWQVME IVLIELLDTP GRRLMEPDLG FKLLDPRPKA Q