| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1565 |
|---|
| Symbol | |
|---|
| ID | 5694402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1863807 |
|---|
| End bp | 1864490 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641264160 |
|---|
| Product | phosphoribosylanthranilate isomerase |
|---|
| Protein accession | YP_001529446 |
|---|
| Protein GI | 158521576 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAA AATTCAACAT GCCCCAAATT AAAATCTGCG GCATTACCAC GCCGGCGCAG
GCTGAACAGT GCGCGGACCT GGGTGTCGAC GCCATCGGCT GCGTGTTTTT TGAAAAAAGT
CCGCGTGACC TCAGTGACGA GCAGGCCAGG GAAATCTGCG CGGCCGTGGC CGGAAAAATC
CAGACCGTTG GCGTGTTTGT CAACGCATCC TATGAAACCA TCATGGGAAA AGTGGGTTTT
TGCGGCCTGA ACGGCGTGCA GCTTCACGGG AGCGAGCCGC CGGAGCTTGT GACCCGGCTC
CGCCGACAGG GGCTGATCGT GATCAAGGCC CTGTTCGGAT CAAAAACCCC GGGGTTGGAC
ACCGGCCCGC TTTATCATAC GGCCTCGGCC CTGCTGGCTG AATGCGGCTC CGGCACACTT
CCCGGCGGCA ACGCCAAAAC CTGGAATTGG GCCGATGCGA AACCGGTGGC CCGGCACGCG
CCCCTGGTGT TGGCCGGCGG GCTGTCACTG GAAAACATTG CCGCGGCAGT TTCGGCGGCC
CTGCCCGATG CCGTGGATGT CAGCTCCGGC GTGGAGGCCG CGCCCGGCAT CAAGGACATG
AACAAAATCG CTTTATTTAT AAACAACATA CAACAGACCG TTTCCGGCAC AAGCCCGGAA
AGACCCTTAA GGAGGATATT CTGA
|
|---|
| Protein sequence | METKFNMPQI KICGITTPAQ AEQCADLGVD AIGCVFFEKS PRDLSDEQAR EICAAVAGKI
QTVGVFVNAS YETIMGKVGF CGLNGVQLHG SEPPELVTRL RRQGLIVIKA LFGSKTPGLD
TGPLYHTASA LLAECGSGTL PGGNAKTWNW ADAKPVARHA PLVLAGGLSL ENIAAAVSAA
LPDAVDVSSG VEAAPGIKDM NKIALFINNI QQTVSGTSPE RPLRRIF
|
|---|
| |