Gene Dole_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1548 
Symbol 
ID5694385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp1843619 
End bp1844239 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content54% 
IMG OID641264143 
ProductTetR family transcriptional regulator 
Protein accessionYP_001529429 
Protein GI158521559 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCC CTCTTGAGAA AGCCCGGTCC AATCCAGACT CCATGAAGGC CAGAATATTT 
GCGTCGGCCC AGAAGCTGTT TGCCGAATAC GGATACGACG GTACCACCAC CCGCATGATC 
GCCAAAGACG TGGGCATCGA TATCTCAACG CTTTATTACC ACTGGGGGGA GAAAAAAGAG 
CTCTACATGG CGGTGCTGGA GCATTTCAAA AGAGAGATCG GTTCCAAGCT CAAGGAGATT 
GAGGCCATGG TGCGGGGCAA GTCTCTTGAA ACCCGTCTGG ACGTGGCCAT TGATGAGATG 
TGCGACTACC TCTTTGATCG CATTGAGGTG ACCCGGCTGA TCCTGTTCAG TTCCTTTATT 
AAGTCCAGGG ACACCGACGA CCTGGGTGTG GCCATCTCCG ATCACATTTC CAACATCGCC 
GTTGCCATGG GCCTGGCTAT GGACAAGAGC AGCATCACAC CCGAGGCCAA GGCCCGGGTC 
ATGGCCATGG TGCTTTCCCT GTTCAGTTTT ATTTCCGGCG AAATCTTTCT GCGCCCGATT 
TTAAACATCG ACGCACCGGA ATATGTCAGG ACCGTCAAGG AGACGTTAAA ATTTACGCTG 
ATCCCCGCGT TCACGCGGTA G
 
Protein sequence
MPTPLEKARS NPDSMKARIF ASAQKLFAEY GYDGTTTRMI AKDVGIDIST LYYHWGEKKE 
LYMAVLEHFK REIGSKLKEI EAMVRGKSLE TRLDVAIDEM CDYLFDRIEV TRLILFSSFI 
KSRDTDDLGV AISDHISNIA VAMGLAMDKS SITPEAKARV MAMVLSLFSF ISGEIFLRPI 
LNIDAPEYVR TVKETLKFTL IPAFTR