Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1545 |
Symbol | |
ID | 5694382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1839342 |
End bp | 1840625 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641264140 |
Product | glutamate-1-semialdehyde aminotransferase |
Protein accession | YP_001529426 |
Protein GI | 158521556 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0283628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGA CCCGGTCAAA AGCCCTTTTT AAAGAGGCGG CAGTCCTTAT TCCCGGCGGC GTGAACAGCC CGGTGCGGGC GGGAAAGGCC GTCGGCACCA CGCCTCTTTT TATCGACCGC GCCCAGGGCG CGGAAATTGT GGACGCGGAC GGCAACGTCT ATATCGACTA TATCGGATCA TGGGGCCCCA TGATTCTGGG TCACCGTCAT TCAGCGGTAA TGGCGGCTAT TGAGACGGTT TTAAAAAGAG GTTTGAGCTT CGGGGCCTCC ACCGACCTGG AGGCCCGGCT GGCCCGGATG GTGGCGGACG CCGTGCCCTC CATCGAAATG GTGCGCATGG TCAACTCCGG CACCGAGGCC ACCATGAGCG CCATTCGCCT GGCCCGCGGC ATCACCGGCC GGGACGGGCT GGTCAAGTTT GACGGCTGCT ACCACGGCCA TGCCGACATG CTGCTGGTGG ATGCCGGTTC CGGCGTGGCC ACCCAGGCCA TTCCCGGCAG CCCGGGCGTA CCGGCTGACG TGGTGCGCCA TACCATCTCC CTGCCGTACA ACAATACGGC GGCCCTGAAG GATTGCCTGG ACCGGAAGGG TGAGCAGATC GCCTGCGTGA TCGTTGAGCC GGTGGCCGGC AACATGGGCA TGGTGGAACC CGATCCCGGG TTCTTGTCCG CCCTCCGAAA GGAGACGGAA AAACACGGCT GCCTGCTGAT CTTTGACGAG GTGATGAGCG GTTTCCGGGT GGCCTATGGC GGGGCCCAGG CCCGGTACAG GATCACGCCG GACATCACCT GCCTGGGCAA GGTCATCGGC GGCGGCATGC CGGTGGGGGC CTACGGCGGC AGCCGGCAGA TCATGAAACA CATCGCGCCC GAAGGCAACA TCTACCAGGC CGGCACCCTG TCCGGCAATC CCGTGGCCAT GGCCGCGGGC ATTGCCACGC TGTCGGAACT GAAGAAGCCC GGCGTTTATG AAGCGCTGGA AGCCAGGACC CGGCGCCTGG CCGACGGCCT GGCCCGAGCC GCGGCTGATG CCGGTGTACC GGTACAGGCC CATGCCGTGG GCGCCATGCT GGGGCTTTTT TTCGCCGACC GGCCGGTTAC CGATTTTGCA TCGGCAAAGA CCAGTGACCT TTCCCGGTTT GCCGCCTATT ACCGGGCCAT GCTGGAAAAG GGAATTTTTC TTGCCCCGTC ACAGTTCGAG GCGATTTTTG TTTCCACGGC CCACACCGAC GATCATATCG ACAGGACAGT GAATGCGGCA AAGGCGGTGT TCGCGGATTT GTGA
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Protein sequence | MNQTRSKALF KEAAVLIPGG VNSPVRAGKA VGTTPLFIDR AQGAEIVDAD GNVYIDYIGS WGPMILGHRH SAVMAAIETV LKRGLSFGAS TDLEARLARM VADAVPSIEM VRMVNSGTEA TMSAIRLARG ITGRDGLVKF DGCYHGHADM LLVDAGSGVA TQAIPGSPGV PADVVRHTIS LPYNNTAALK DCLDRKGEQI ACVIVEPVAG NMGMVEPDPG FLSALRKETE KHGCLLIFDE VMSGFRVAYG GAQARYRITP DITCLGKVIG GGMPVGAYGG SRQIMKHIAP EGNIYQAGTL SGNPVAMAAG IATLSELKKP GVYEALEART RRLADGLARA AADAGVPVQA HAVGAMLGLF FADRPVTDFA SAKTSDLSRF AAYYRAMLEK GIFLAPSQFE AIFVSTAHTD DHIDRTVNAA KAVFADL
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