| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1504 |
|---|
| Symbol | |
|---|
| ID | 5694341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1794750 |
|---|
| End bp | 1795112 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641264099 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_001529385 |
|---|
| Protein GI | 158521515 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000779378 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA AAGATGTCGA CTACTTCAAG GAACTTCTTA CCAAACGGTT GAACGAGCTG
CTGGAGCAGG CCGATGGTAC GGTATCCGAC ATGACCAGTG ACGAAGAGAC CTTTCCGGAC
CCAACGGACC GGGCATCGCA CGAATCCGAG CGCAACTTCA CGCTGCGGAT ACGGGACAGG
GAGCACAAGC TGATCAAAAA AATCAAAAAG GCCCTGGAAC GAATCGAAAA CGGGACCTTT
GGCGTCTGTG AATCCTGCGA GGAAGAGATC GGCGTGGAAC GGCTGAAGGC ACGGCCGGTC
ACCACCCAGT GCATCAAGTG CAAGACCAAA GAGGAGGAGA TGGAGAAGGT TCTTGGCCTG
TAG
|
|---|
| Protein sequence | MKKKDVDYFK ELLTKRLNEL LEQADGTVSD MTSDEETFPD PTDRASHESE RNFTLRIRDR
EHKLIKKIKK ALERIENGTF GVCESCEEEI GVERLKARPV TTQCIKCKTK EEEMEKVLGL
|
|---|
| |