Gene Dole_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1474 
Symbol 
ID5694311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1762579 
End bp1763583 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content59% 
IMG OID641264069 
Productnitroreductase 
Protein accessionYP_001529355 
Protein GI158521485 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0778] Nitroreductase
[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGT CATTAAAACA GGCCTATCTG CCGGATATGA ATTTTCCCGT CCGGACCATT 
GATGCCGAAA AATGCAGCAA GTGCGGCCGG TGTTTCGAAA CCTGCCCCAC CTACGGATAC
CGTTGGGAAA AAGGCCAGGT GCCCGAGCCC GTGGGCTACG GCGGATTCTC CCAGGCCTGC
ATCAACTGCG GCAACTGCAT TGCCGTCTGC CCAACCGGCG CTATCACCAT GACCGGCAGC
TTTGTGATTC CCTCGGGCCG GTATAAGGTG CTGCTGGAGG GGAAAATGGC GGCCCCCCAT
CCCCTGGGCG CCGAAGAACA GCCCTATGAG ACCATTGAAC CGGAACTCAC CGAGGTGGAA
AAGGCCATTT ATACCCGCCG CTCCAACCGG CTCTTCAAGG ACAAGCCCGT GCCCCGGGAA
CTGCTGGCCC GCATTCTGGA GGCGGGACGG TTTGCCCCGT CGGCGGGCAA CTGCCAGCCC
TACCGGTTTA TCGTGATCAC CAACCAGAAG ATCATCAAGG AGTTCGAGCG CCGGGCCATG
GGCTCTCTGC GGCTGCTCAA GAACCTCTAC ATGGCAAAGG ACGGCAAACG GTCCACGATC
AAGAAGATCG TGTTCAGTGT CATCAGCTGG TTTTCGATCA ACAAGATGGA TCCCCGGCCC
ATCACGGCCA TGGAAAAAGC GGACCACACG GACGGTGCCA TCTACTTCGA CGCGCCGGCG
GTGATCCTGA TTCTCAAGGA CAAGCGGGGG ATCAGTAATC CGGACCTGGA TACCGGCATC
TGCGCCCAGA ACATGGTGCT GGCGGCCCAT TCCCTGGGCC TGGGCACCTG CTATGTGTCG
CTTCCCATGG AGCCGCTTTC CATGCCCCTG ATGGCGGGGT TTCGCAAAAA GCTGGGGATT
GGAAAACCTT ATGTCGCGGT GACCAGTATT GCCGTGGGCT ATGCCAGGGG AAAGATCGAC
GGCCCGGTGA AGCGCGACAC GCCCAGGGTG GACTGGAAGC TTTAA
 
Protein sequence
MFESLKQAYL PDMNFPVRTI DAEKCSKCGR CFETCPTYGY RWEKGQVPEP VGYGGFSQAC 
INCGNCIAVC PTGAITMTGS FVIPSGRYKV LLEGKMAAPH PLGAEEQPYE TIEPELTEVE
KAIYTRRSNR LFKDKPVPRE LLARILEAGR FAPSAGNCQP YRFIVITNQK IIKEFERRAM
GSLRLLKNLY MAKDGKRSTI KKIVFSVISW FSINKMDPRP ITAMEKADHT DGAIYFDAPA
VILILKDKRG ISNPDLDTGI CAQNMVLAAH SLGLGTCYVS LPMEPLSMPL MAGFRKKLGI
GKPYVAVTSI AVGYARGKID GPVKRDTPRV DWKL