| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1470 |
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| Symbol | |
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| ID | 5694307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1756083 |
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| End bp | 1758863 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264065 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_001529351 |
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| Protein GI | 158521481 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTG CACCCCCGCC TGCCTATACT GAAGAAGCGG CCCGCCTGGA GGTGGACCTG
GCCCGGGCGG CCCTTGAAAC GGCTGACCGG GAGGCGGCCC GGATCCATTT TCACAACGCG
GTGGCCCGGC TTGCCGCCGG GGACCGGCCG GAAACCAGCC ATGTGCTGGT GGCAGCCACC
CTGGAGCTTT CCAACCTGAA CTTTATTCTG GGCAAAGGGT TTGGCCAAAC CATCCCCTTT
CTCCAGGCGG CCCTGAAAGC GGCCGAACAC CTGGGCGACC TTCGCTCAAA GGCCATGATC
AAGCTGCACC TGGGCCGGCA CTACTATTTT TCCAACCAGC GGTCGGCGGC CATTCCTTTT
TTTCAACAGG GCAAAACCGA GGTGGAAGCC CTGGGGGACG AGGACATTCA GGCCGGCGCC
GCCGAATTTG TCGGCCTTTA CCACCACCTT CAAGGCATGT TCACCAAAGC CATCGCCTAC
TTTGAAGCCG CGGTGGAACG GTTTGAAACC ACTCAGGGGC CCCTGGTACC CAACCCGTCG
GCCCCCATGT GGCTGGGCTA CTGTGCCGCC TACCTGGGCC AGTTTCACCG GGCCATCGGC
ACCCTGGACT ACTACCGCCG CATGCTCCTG GAACGGGGAG ACCGGGCACT TGCGGCCACC
ACCCGGGCCG TGCTGGGTAT TGTCCTGCTG GAACTCAAGA AGAACAAGGA GGCGGCCATT
CACCTGTCCG GCGCCATTTC TGAAGGGGAA AAGACCGGCA ACGACCTGGC CCTCTATTTT
GCCAGGGGCG GCATGGCCTA CTACCACTTT GCCGAGGGCC GGCTGGAGGA GGCCAACCGC
TACATCACCC ACGCCATTGT CGAAGGGACC ACCGCCGGCC TGGTCCGGCA GTATGCCACG
CCGATTTTTC TGGAGATGGG GTTTGAACTC TACAAGGCGG GCAAGCCCAT CTTTTCCGAA
ACCGAGATGC AGCGGGAAGT GATGCGCATC ATGCGGGAAC CCAACATTCA TTTAAAGGGC
GTGCTGCTGC GGCTGATGGC CGAGCAGCGC CTTTTTCTCG GTGCCGAGCC CGAAACCGTT
GAAAAGGACC TGAACGCCAG CGCGGAATAC CTGGCGCAGT CGGGCACCCC GGTACAACTG
GCCAAAACCC GGTTTACCCT GATGCGCATT CACCTGAAGC GGGACGACCC TGCCGAAGCC
CGGCGCCAGG CCCGAAAAGC CTGGAAAGAA CTGGCCGGCT ACGGAGAGAC CTTTTTCCCG
GACGACCTTC GCCACCTGCT TGCCGAAGAG CCGGCCCGGG AACCGACGCC GGAGGTAAAG
GAGGAATTCC TGCTCCGGTT TATCGACATC ATTTCCGAGC TCATGCCCGG CCCGGCGCCG
GACCGGCTGT TTACCCGGCT GGTGCAGGCC ACCAACCGTT ACTTCGGCGC GGAACGGGGC
GCCCTGTTCT GGTTTTCCGA TACGCCGAAA CAGACACCGG CCCTGCGTGC CGCCTGCAAC
CTGACCGAAA CCGAGATCTT TTCCAACGCC TTCCGCTCCA ATCTGGCCCT GGTGTTTGAC
GCATGGCGGG AAGGCCGGTC TATCCTGGTA CGTCGGGGCG ACAGGTCCGA CGATCCCTAC
CGGGAAAAGG CGATTCTCTG CCTTCCCTTT CAAATCGAGG GTAAACCCAG GGGCGTGCTG
TACCATGACA ACGCCTATGT AACCGACTGT TTCAACTTCC TCGACCCGGC CCAGTTAAAC
CGGCTGGTCC ACACACTGGG CAGCTATATC GAACACGCAT GGGATCTTTC CCGGGGATTT
GAAAAACTCC GGCCGCCACT GGCCGTGCCC TCCACCGTCA CCGGAACGGT GGAGATCGTG
GGGGAAAGCA GCCGGATCAA GGCCGTGCTG ACCCAGGTGG ACCAGGTGGC GCCAACGGAC
AGCACCGTAC TGATCCTGGG TGAAACCGGC GTGGGTAAGG AGCTGGTGGC CCGGCGAATA
CACCAGCAGA GCCGCCGGTG CGATATGCCC CTGATCGTGG TGGACCCCAC CGCCATACCC
GAGGGCCTGG TGGAAAGCGA GCTGTTCGGC CATGAAAAAG GGGCTTTCAC CGGCGCGGAC
CGCCAAAAAA AGGGGCTGCT GGAACTGGCC CACCAGGGCA CCCTGTTTAT CGACGAGGTG
GGTGAGATTC CCAAGTCGAT CCAGGTCAAG CTGCTGCGGG CGCTCCAGGA AAAGACCATT
CAGCGCCTGG GCGGCACCAA GCCCCTTTTC TCCGACTTCC GGCTGATCGC CGCCACCAAC
CGGGACCTGG CCGGGCAAGT AGCTGCCGGC CGGTTCCGGG AGGACCTCTA TTACCGGCTT
AACGTCATTC CCATCACGGT GCCGCCCCTG AGGGAACGGA AACAGGACAT CGTTCTTCTG
GCCGCCTGTT TCCTGCGGCG CCACAGCCTG CGCCACAACC GGCCTGCAAT GGTGCTGAGC
CCGGAAGTCC AACAACGGCT TTGTGCCTAT CCATGGCCGG GCAATGTGCG GGAGCTGGAA
AACGTGATTG AGCGCGGGGT ACTGCTCTCC ACCGGAGACC ACCTGGAACT GGACCTGCCC
GCGGGCCATA CGCGGCCCGG GGCCGATCCG TTTACCGACC TGCCCACCCT TGACGAACTG
CAGCGGCGCT ATATTCACCA CGTGCTTGAA AAAACCGGGG GCAAAATCGC CGGGCCAGAC
GGGGCCGCCA AAATCCTTGG CATGAAACGC ACCAGCCTGT ATAACAGAAT GAAGCGGCTG
AATGTGCGGG GAAACCGGTA A
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| Protein sequence | MNPAPPPAYT EEAARLEVDL ARAALETADR EAARIHFHNA VARLAAGDRP ETSHVLVAAT
LELSNLNFIL GKGFGQTIPF LQAALKAAEH LGDLRSKAMI KLHLGRHYYF SNQRSAAIPF
FQQGKTEVEA LGDEDIQAGA AEFVGLYHHL QGMFTKAIAY FEAAVERFET TQGPLVPNPS
APMWLGYCAA YLGQFHRAIG TLDYYRRMLL ERGDRALAAT TRAVLGIVLL ELKKNKEAAI
HLSGAISEGE KTGNDLALYF ARGGMAYYHF AEGRLEEANR YITHAIVEGT TAGLVRQYAT
PIFLEMGFEL YKAGKPIFSE TEMQREVMRI MREPNIHLKG VLLRLMAEQR LFLGAEPETV
EKDLNASAEY LAQSGTPVQL AKTRFTLMRI HLKRDDPAEA RRQARKAWKE LAGYGETFFP
DDLRHLLAEE PAREPTPEVK EEFLLRFIDI ISELMPGPAP DRLFTRLVQA TNRYFGAERG
ALFWFSDTPK QTPALRAACN LTETEIFSNA FRSNLALVFD AWREGRSILV RRGDRSDDPY
REKAILCLPF QIEGKPRGVL YHDNAYVTDC FNFLDPAQLN RLVHTLGSYI EHAWDLSRGF
EKLRPPLAVP STVTGTVEIV GESSRIKAVL TQVDQVAPTD STVLILGETG VGKELVARRI
HQQSRRCDMP LIVVDPTAIP EGLVESELFG HEKGAFTGAD RQKKGLLELA HQGTLFIDEV
GEIPKSIQVK LLRALQEKTI QRLGGTKPLF SDFRLIAATN RDLAGQVAAG RFREDLYYRL
NVIPITVPPL RERKQDIVLL AACFLRRHSL RHNRPAMVLS PEVQQRLCAY PWPGNVRELE
NVIERGVLLS TGDHLELDLP AGHTRPGADP FTDLPTLDEL QRRYIHHVLE KTGGKIAGPD
GAAKILGMKR TSLYNRMKRL NVRGNR
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