Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1421 |
Symbol | |
ID | 5694256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1692281 |
End bp | 1693888 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264014 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001529302 |
Protein GI | 158521432 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0232449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCTG AACCCACGGG GGCCACAGCG GCGGCACAGC GAATACGGAA ACGCCATTTC CTGATGAGCG CCGCCTCTTA TCTGATTATC GGCATGCTGC TGGTATACGT TCAGCAGAGC CACATTCTGG ATATCACCCC GATCCTTCTT TACACTCTTC TGGCAGCGGC CCTGACGGTC AACATCGCCT TCTACGTGGT CATCTCCACG GGCCTCAATA CCCGGCTCAA CGACCCCAGC CTCACCCTTG CCCAGGTGAT CACGGCCATT GCCCTGCTCA TGGCCCTGAC CTATGTCGCC ATCGAACTAA AGGGCCTGAT CCTTACCGGC TACCTGCTCA TCTTTCTTTT TGGCACCTTT TATCTCCAGG TGCACCAGTT CCTGATACTG ACGATTTTCG CCGCCGCCGG CCACGGCCTG GTCATCCTGC TGCTGGCCTT TTCCCCCGGC CGGCCGATCC ACCTGCAGAC CGAACTGATG TACTGGGTGG CCCTGGTAGC CATTCTCCCC TGTTTTGCCG TGCTGTGCGG CGACGTGAGC CGGCTTCGCA AAAGAAGCTA TGCCACCCAC CGGCAACTGA AAACATCGGA GGCCCGTTAC CGGGGGCTGC ACGACAACAT GACCGATGCG TCGGTGCTGC TGGACCTCCA GGGCCGCATT CTAACGGCCA ACGCGGCGTT TCTGGCCATT GTCGGCATTC AGGATGTCCG CAACCTGAGC CGGTATCCCT TTGTCGACCT GCTCCATCCT GAAGACCGTC TGGCATGGCA GCGACAACTG GGGGCAGTCG ACCGGGCAGA CCGGACGAGC ATGGCTTACC TGAAAATCAT CGACAGAGAT GAACAGGTCC GGGAAATGGA ATGCAAAACC AGCTTTGTAG GGGAAGCAGG CGATGTCACC GGCCTGCTGA TGACCCTGCG GGACATGAGA ATCACCCGAA AGTTGAAAAC ACAGATCGCC GATTCTTACA AGGAGCTGGA ACAGGCAAAG TCCTTCACCA TCCTGGGGCT GGCCAAGCTC ACCGAATTCA GGGACAAAAA CACCGGAGAC CACCTGGAAC GAATTCGGGG ATACACCCGG ATTCTGGCCA CCCAGCTGGC CACCCTGCCC AATTACGCCG ATCATATCAC CGACCGTTAC ATCAACGATA TCTCCGTATC CTCAGTGCTT CACGATATCG GCAAGGTGGG CATGCCCGAC ACCATTCTTT TCAAGCCCGG CCCGCTCACC AGCGAGGAAT TTGAAATCAT CAAACAGCAC GCTCTTCTGG GGGGAGAGGC CATTGAAAAG ACGGAAGGAC TGATTCAGGG GGAGTCATTT TTAAATCTCG GCAAAATCAT AGCTTACTGT CATCACGAGC GGTGGGACGG CTCCGGCTAT CCCATGGGGC TGGCCGGGGA GGAGATTCCC CTGGCCGCCA GAATCGTGGC GCTGGCCGAC GTGTATGACG CCCTGACCAC CCGCCGCGTA TACAAGGACG CCATTCCTCA CGAGGCGGCC AGGGCCATCA TCGTGGCGGA AAAGGGCCGG CATTTTGACC CTGACGTGGT GGACGCCTTT TGCGCCTGCG ACGATCAAGT CCGGGACCTG GCGCGAAAGG CGGGCTGA
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Protein sequence | MMPEPTGATA AAQRIRKRHF LMSAASYLII GMLLVYVQQS HILDITPILL YTLLAAALTV NIAFYVVIST GLNTRLNDPS LTLAQVITAI ALLMALTYVA IELKGLILTG YLLIFLFGTF YLQVHQFLIL TIFAAAGHGL VILLLAFSPG RPIHLQTELM YWVALVAILP CFAVLCGDVS RLRKRSYATH RQLKTSEARY RGLHDNMTDA SVLLDLQGRI LTANAAFLAI VGIQDVRNLS RYPFVDLLHP EDRLAWQRQL GAVDRADRTS MAYLKIIDRD EQVREMECKT SFVGEAGDVT GLLMTLRDMR ITRKLKTQIA DSYKELEQAK SFTILGLAKL TEFRDKNTGD HLERIRGYTR ILATQLATLP NYADHITDRY INDISVSSVL HDIGKVGMPD TILFKPGPLT SEEFEIIKQH ALLGGEAIEK TEGLIQGESF LNLGKIIAYC HHERWDGSGY PMGLAGEEIP LAARIVALAD VYDALTTRRV YKDAIPHEAA RAIIVAEKGR HFDPDVVDAF CACDDQVRDL ARKAG
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