| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1420 |
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| Symbol | |
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| ID | 5694255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1690646 |
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| End bp | 1692277 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641264013 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001529301 |
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| Protein GI | 158521431 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.108233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATTC TGTTTCCCAA AAACGACCCG GAACAAACCC TTCGGCTTCA GCGGTTTTTC
ATGGCCGCCG CCTCCTACGG CATCTGCATC GGCCTTTTGT ACTATTTTTT CTTCCAGGGC
CAATTCAGCC TCCCCCTGGG TCCATCCCTC GCCCTGACCC TCTTCTGCGC GGTTTACAAC
ATCGCCGTAT TCACCGTCCT GCGCACCGGC ATCAACAAAC GGTTTGCCGA CCCCAGCCTC
ACCCTGCTCC AGATCATGGT GGCCCTGGGG CTGCTGCTGG GCGTGACCTT TTACACCGAC
CTGCACCGGA CCATCCTGAT TCCCTTCTAC CTTGTCATCT TCGTGTTCGG CGTGTTTCAG
CTGAAAGTCC GGGATTTCCT GCTGATGACC CTGCTCACCC TCTCCGGTTA CGGATTTATC
ATTCTCATGC TCTACTACCA CCGGCCGGAG AAAATGGTCC TTCCCCTTGA AATCATGAAC
TGGATCATCC TGGCCACCGT GCTGCCCTGG TTCTCCATTG TGGGCGGATA TATCAGTAAT
CTGCGGACCA CCATCTCCTC TATCAACACG GAACTCAAAA CATCCATGCT GCGGTATAAG
AGCCTGTTTG AGAATATGCT CGACATGGTG CTGGTCCTGG ATACCGAGCA TCGTATCCTG
ATCGCAAACC CCCTGTTTTA TACCACCACA GGCATCTCCC CGGAAAAAAC CGTTGCCGCC
TGCCATTCCT TTATCCACCC GGAGGACCTG GACCGGATGG AAAAAGAGCT GCTGGCCGAA
CTGCCCGGGC AGGAGGTGAT CACCGATTTC CAGTTCAGGG TAAAGGACAG AGACGGCAAT
GCCCTGCACG TGGAGTGCAA TGCCCGGTGT ATCAAAAACG AGGACCAGAT TCTGGGCATG
CAGCTGATGC TGCGCGATAT CACCCAGCGC AGGCAGCTGG AAGACCAGCT CCGCCACTCC
TACGATAACC TCAAAAACAC CCGTGAGGTC ACCATCATGG GCCTGGCTAA GCTGGCTGAA
TACCGGGACA AGTCCACCGG TGGCCACCTG GAGCGAATTC GGGAATACAG CAAGGCCCTC
ACCCGGCAGG TGGCCCAGCT GCCCGAATAC AGGGATTACA TCACCGATGA ATATGTAGAA
ACACTCTACC TTTCTTCTAT TCTTCACGAT ATCGGCAAGG TGGCCATTCC CGACGCCATT
CTTCTCAAGC CGGCCCGGCT GGATCCGGAT GAGTTTGAAA TTATCAAGCA GCATGCCTCC
CTGGGCGGCG ACGCCATCAA GGAGGCCGAA GCCCAGATAC GGGGCAAATC GTTTCTGACC
ATGGGAAAAG AGATCGCCTA TTATCACCAT GAAAAGTGGA ACGGCCAGGG GTATCCGGCC
GGTCTTGCCG GCAAAAGCAT TCCTCTGTCG GCCCGTATCG TGGCCCTGGT GGACGTGTAT
GACGCCCTGA CCACCGACCG CGTTTACAAA AAAGCCTACC CCCACGACAA GGCCAGAACC
ATCCTTTTAA ACGACCGGGG CATCCACTTT GATCCCGATA TCGTGGATGC CTTTTTCGCC
ATCGAAGACA CCTTCAAAAC CATCGCGGAA ACCTACCGGG ATCGGGCTTC CATCAAACCC
TGGTTGAGTT AG
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| Protein sequence | MSILFPKNDP EQTLRLQRFF MAAASYGICI GLLYYFFFQG QFSLPLGPSL ALTLFCAVYN
IAVFTVLRTG INKRFADPSL TLLQIMVALG LLLGVTFYTD LHRTILIPFY LVIFVFGVFQ
LKVRDFLLMT LLTLSGYGFI ILMLYYHRPE KMVLPLEIMN WIILATVLPW FSIVGGYISN
LRTTISSINT ELKTSMLRYK SLFENMLDMV LVLDTEHRIL IANPLFYTTT GISPEKTVAA
CHSFIHPEDL DRMEKELLAE LPGQEVITDF QFRVKDRDGN ALHVECNARC IKNEDQILGM
QLMLRDITQR RQLEDQLRHS YDNLKNTREV TIMGLAKLAE YRDKSTGGHL ERIREYSKAL
TRQVAQLPEY RDYITDEYVE TLYLSSILHD IGKVAIPDAI LLKPARLDPD EFEIIKQHAS
LGGDAIKEAE AQIRGKSFLT MGKEIAYYHH EKWNGQGYPA GLAGKSIPLS ARIVALVDVY
DALTTDRVYK KAYPHDKART ILLNDRGIHF DPDIVDAFFA IEDTFKTIAE TYRDRASIKP
WLS
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