| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1367 |
|---|
| Symbol | |
|---|
| ID | 5694201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1626158 |
|---|
| End bp | 1628767 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641263959 |
|---|
| Product | serine/threonine protein kinase with Chase2 sensor |
|---|
| Protein accession | YP_001529248 |
|---|
| Protein GI | 158521378 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG4252] Predicted transmembrane sensor domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTA TAAAAAAACA TCCGACGCTT ATATTCGGCC TGCTGCTGAC ACTCGCCTTT
CTTTTCATCA CCCTTGTCCG GGTGGAATTC TTCGATACCC TGGGGCTCAA GCTTTACGAC
ACCGTGATGA AGGTCAAGGG CCGGCCCGAC CCCTCCGATA CCATCGTGAT CGTCGACATC
GACGATGAAT CCATTGAAAA GCTGGGCCGG TGGCCCTGGC CCCGGTCCCT GATCGCCCGG
GGCATCGACA AGATCAACGA GGGCGACCCG TCGGTGATCG GGCTTAACAT TATCTACAGC
GAGCCCGAAG AGAATGCCGG GCTGATGGAA ATCGATTTCC TGGAGACCCG GTTCCGCGAG
AATTTTCTGC CGCCCCTGCA GGAGGTGGCA ACAGCGGCCC CGCAACCGGC AAGAAACGCC
GGGCCGCCCC TTCAGGAGAC CCTCGACCAG GTGCAGTCCG GGTTTCTGGA GGAACTGGAC
CTGGCCAGAA AACGGCTGGA CCGGGACTCG ATTCTGGCCG CCTCCCTGAC CCGGTCGGGC
CGGGTGGTGC TGCCCATCTT TTTTAAAGAC ACCCTGGTGC CGGACAGCGG GCAGCCGGAG
GAAGCGGAAG AGACACTTAA AGACCAGGCC ATCGGCAATG TCCGCATTCC GCCGGGAGCG
GCCTGCCCAC AGGCCACCGA AGCCGTTCTG CCCATTCCGG TATTCCGCCG GGCCGCGGCC
GGCATGGGCC ACATCAACGT GGCCCCGGAC CATGACGGCA CCTATCGAAG AGAGCGGATG
CTCTACGAAT ACAGGGGCCT GTTTGTCCCC TCCTACGCAC TGGTGCTGGC AGCCCGGTAC
GCCGGCGTAT CCCCGAACAA CATTGGCGCG GATATCGGCA TGTCGGTCTC ATTCAAAAAG
ATCGAGATCC CGGTTACCCC CTATTCGGAA CTGCTCATCG GTTTTCACAC GGCACCGGAC
GCCTTTCGCC ATTACTCCTT TTTTGACGTG CTCAACGACA AAATCCCGCT GCGGGTCTTT
ACCAACAAAA TCGTGCTGGT CTCTCTGTCG GCCAAGGGCC TCGCCACGCC CCTGAGCACA
CCGGTGGCAC CGTCCACCAC CTTTGGCGAC TTTACCGCCC ATGTGCTGTG GTCGGTGCTC
AATCAGCAGT TTATCCGGCA GTTTCCCGGC ACCCGGCTGA TAGAACTGGC CGCAGTGCTA
TTCCTTGGCC TGTTGATCAC CCTGGTGCTG CCCCGGTTGA AGGCGGCCAT CTCCGGCGGG
CTTTTTTTCG TGCTGCTGGC CCTGCTGCTG GGCGGATTTG CCTGGGCCTT TCTTTCCCGA
GGGGTCTGGC TGGACGTGAT CTACCCGGTA CTGCTGCTGG TCATCGGCTA CACCGGCATC
GTGTCGATCC GCTATTTTCT CACCGAGGCG GGCAAGGAAA AGGTGGAAGG CGAGTCGGCG
GAGACCAACC GCATGCTGGG CATCTCCTTC CAGTCCCAGG GCATGCTGGA CATGGCCTTT
GACAAGTTCC GCAAAGTACC GATGGACGAC CAGATGAAGG ACCTGCTCTA CAACCTGGCC
CTGGACTATG AACGCAAGCG ACAGCTCAAC AAGGCGGCGG CGGTCTATGG GTACATTGAA
GAGTACGACA ACAAGTTCAA GGACATCGTG GAGCGCAAGA AAAAACTGCT GGTGGCCAGT
GAAACCATGG TGTTCGGCGC CGGGTTTCTG GGCGGGGGCG GCGCCGGCGA CGGCATGGTG
AGCACCGACC CGTCCATACG GCCCACCCTG GGGCGCTACG AAATTCTCAA ACAGCTGGGC
AAGGGCGCCA TGGGCGTGGT CTACCTGGGC CAGGACCCCC GTATCAACCG CACCACGGCC
ATCAAAACGG TCCGGTTCTC CGACGAGTTT GACGAGGAAG AGGCCGCGGA GATGAAAAAG
AAGTTCTTTC GCGAAGCCGA AAGCGCGGGC ACCCTCTCCC ACCCCAATAT CGTGACCATC
TACGACGCCG GCGACGAACA GGACCTGGCC TACATCGCCA TGGAGTACCT GGAAGGCGAC
AGCCTGGAAA AGTTTCAGAA AAAAGAGAGC CTGATCCCCA TGCGGCGGCT GATCGGCTAT
ATCGCGGACA TCGCCGAGGG ACTGGATTAT GCCCACAGGC AGGGCATTGT GCATCGGGAC
ATCAAACCGG CCAACGTGAT GCTGCTGAAA AACGGCAAGG TCAAGATCAC CGACTTCGGC
ATCGCCCGTA TCACTGCTTC GTCCCAGACC AAGACCGGCA TTGTCAAGGG TACCCCCTAC
TACATGTCGC CGGAACAGAT CTCCGGCAAG AAGGTGGACG GCCGCAGCGA CATCTTCTCT
CTGGGCGTGA TGACCTTCCA GCTGCTCACG GGAACGGTGC CGTTCAAGGG AAGCAGCCCG
GCGGCCCTGA TGCACAAGAT ACTCAATTCG CCCCATCCGG ACCCCAGAAC CATCAACCCC
AGGATTCCCA AGCCCCTGAC GGCCATTCTC AACAAGGCCC TGGAAAAGGA CCCGGCCAAA
CGGTATCAGA CCGCCGGGCA GATGGCGGCC CACCTGCGCA CCCTGGGAGA AAAAATGGAC
GCGGCCATGG CGAAAAAAAC GCAGGCATAA
|
|---|
| Protein sequence | MNFIKKHPTL IFGLLLTLAF LFITLVRVEF FDTLGLKLYD TVMKVKGRPD PSDTIVIVDI
DDESIEKLGR WPWPRSLIAR GIDKINEGDP SVIGLNIIYS EPEENAGLME IDFLETRFRE
NFLPPLQEVA TAAPQPARNA GPPLQETLDQ VQSGFLEELD LARKRLDRDS ILAASLTRSG
RVVLPIFFKD TLVPDSGQPE EAEETLKDQA IGNVRIPPGA ACPQATEAVL PIPVFRRAAA
GMGHINVAPD HDGTYRRERM LYEYRGLFVP SYALVLAARY AGVSPNNIGA DIGMSVSFKK
IEIPVTPYSE LLIGFHTAPD AFRHYSFFDV LNDKIPLRVF TNKIVLVSLS AKGLATPLST
PVAPSTTFGD FTAHVLWSVL NQQFIRQFPG TRLIELAAVL FLGLLITLVL PRLKAAISGG
LFFVLLALLL GGFAWAFLSR GVWLDVIYPV LLLVIGYTGI VSIRYFLTEA GKEKVEGESA
ETNRMLGISF QSQGMLDMAF DKFRKVPMDD QMKDLLYNLA LDYERKRQLN KAAAVYGYIE
EYDNKFKDIV ERKKKLLVAS ETMVFGAGFL GGGGAGDGMV STDPSIRPTL GRYEILKQLG
KGAMGVVYLG QDPRINRTTA IKTVRFSDEF DEEEAAEMKK KFFREAESAG TLSHPNIVTI
YDAGDEQDLA YIAMEYLEGD SLEKFQKKES LIPMRRLIGY IADIAEGLDY AHRQGIVHRD
IKPANVMLLK NGKVKITDFG IARITASSQT KTGIVKGTPY YMSPEQISGK KVDGRSDIFS
LGVMTFQLLT GTVPFKGSSP AALMHKILNS PHPDPRTINP RIPKPLTAIL NKALEKDPAK
RYQTAGQMAA HLRTLGEKMD AAMAKKTQA
|
|---|
| |