Gene Dole_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1159 
Symbol 
ID5693993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1382547 
End bp1385555 
Gene Length3009 bp 
Protein Length1002 aa 
Translation table11 
GC content61% 
IMG OID641263752 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001529042 
Protein GI158521172 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit
[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGA ACAGTAAGCC ATCCGGTTCG GTGATGATCG TCGGCGGCGG TATCGGCGGC 
ATGCAAGCGG CCTTGGACCT TGCCGACAGC GGGTTCAAGG TGCACATGGT GCAGAAGGAT
TCCTCCCTGG GCGGCACCAT GGTCATGCTG GACAAAACCT TTCCCACCGG CGACTGCTCC
ATGTGCATGA TCTCCCCCAA GATGGTGGAG ATCGGCCGCC ACCCCAACAT CGAGATTCAC
ACCCTGGCCG AGGTGACGGC CATTGACGGC GAACCGGGCC GCTTTACCGC CACCGTGAAG
CTGCTGCCCC GGTACGTGGA CCCCGACAAA TGCACGGGAT GCGGCATCTG CGAGAAGAAA
TGCCCCAAGC TGGTGACCAG CGAGTTTGAA CAGGGCCTGA CCAAGCGCAA GGCAATCTAC
TCCCTGCTGG CCCAGGCCGT GCCCAACACC CGGGTCATTG ATTACGACAA CTGCCTCTAT
TTTCAGCGGG GCCGGTGCAA GGCCTGCGAA AAATTCTGCA CCGCCGGCGC CATCAATTTT
GAAGACACGG GAAAAGAGAT CTCCCTTACC GTGGGCGCGG TGATCCTGTC GCCGGGCCTG
GCCCGCCACA GCGCGGCCCG CCACCCGGAG CTGGGCTTCG GCCGGTGGCC CAACGTGGTC
TCATCGGTCC AGTTCGAACG AATCCTGTCG GCCTCGGGCC CCTTTTCCGG CCAGATCCTC
CGGCCCGGCG ACAAGAAGCA CCCCCACAAG ATCGCCTGGA TCCAGTGCGT GGGGTCCCGG
GACACCAACC ACGGCAACCC CTGGTGCTCA TCGGTCTGCT GCATGTACGC CACCAAGCAG
GCCGTCATCG CCCGGGAGCA CGACGCCTCT GTGCAGCCCA CCATCTTTTA CATGGAGATG
CGGGCCTTTG GAAAAGACTT TGACAAGTAC GTGGACCGGG CCAAAAACCA GTACGGGGTG
CGGTACCACC GGGCCATGGT ATCGGCGGTC CATGAAGATG CGGACACCGG CAACCTGGTG
CTGCGGTACG CGGAGATGGA CGGCACCATA ACGGAAGAGA CCTTTGACAT GGTGGTGCTC
TCCATAGGCC TGGAGCCCCA CGCCGACGCC CTTGAGTTTG CGAAAACCTT CAATATCGAA
TCCAACAGAC ACGGGTTTGC GGCAACCACC CCCTTTGCGC CGGTGGACAC CACCCGGCCG
GGGGTGTTTG TCACCGGCAC CTTTCAGGGG CCCAAGGACA TTCCGGAAAC CGTCATCCAG
GGCAGCGCCG TGGCCGGAAA GGCCATGGCC CTGCTGGGTG AGGCCCGGGG CACGGAGATC
ACGGAAAAAG CCCTGCCCCC GGAAACCGAC ACCACCGGGG CCGAGGCCCG CATCGGCGTG
CTGGTATGCC ACTGCGGTAT CAACATCTCC CAGACCGTGG ATATTCCCGC CGTGGTGGAA
ACGGCCAAAA CCCTGCCCAA CGTGGTGTTT GCCGATGACC TGATGTACGC CTGCTCCCAG
GACAGCCAGG AAGCCATTAA AGCCCTGGTC CAGGAGCACA ACCTCAACCG CGTGGTGGTG
GCCTCCTGTA CGCCAAGAAC CCACCAGCCC CTGTTCCAGG AGACCATTCG GGACGCGGGC
TTAAACAAGT ACCTGTTTGA GCTGGCCGAC ATTCGGGAGC AGTGCTCCTG GTGCCACATG
GGCCAGAATG AGCCGGCCAC GAAAAAGGCC ATCGACATCG TCAAAATGAC GGTGGCCAAG
GTCAAACTGT TCGAGGCCAT TCACACTGAC TCGGTGCCGG TCACGCCGGC GGCCATGATC
ATCGGCGGCG GCATCGCCGG CATGACCGCG GCCCTGGCCC TGGGAGACCA GGGCTACGAG
GTGCATATCG TTGAAAAAAC CAGCGCCCTG GGCGGGCTGG TCAAAAACGT TTACCGGACC
CTGGACGGCC GCGACGTTCA GTCCTTTCTG ACCGACTGCA TTCAAAAGGT CGAGCAGCAC
CCGAAAGTCA CCGTCCATAC CGGAACAGAC ATCAAAAAAA CCGACGGGTT TGTGGGCAAC
TTTGTCACCA CCCTTTCCGA TGGCGCTGCC ATTTCCCACG GCGCCATCAT CGTGGCCACC
GGCGGTGTGG AGTATGCGCC GGTCGAATAT GAATACGGCA ACAGCAGTTC CATTGTGACC
CAGCGGGAAC TGGAAAAACG ACTGGAGACC GAAACCTTTT CGCCGACGGC CGCCTTTGCC
ATGATCCAGT GCGTGGGGTC CAGGGAGGAA CCGTTCAACT ACTGTTCCCG TATCTGCTGC
CAGGACGCCA TTAAAAACGC CATTGCCATC AAGAAAAAAT ACCCCAAAGC CGGGGTCACC
ATTTTCTACC GGGACATTCG CACCTACGGC CTGCGGGAGG ATTATTACCA GGAAGCAAGA
AGCCTGGGCG TGCTGTTTGT CCGGTTTGAG CCGGAAAACA AACCCGAGGT GCGCGTCGAC
GGCGACAGAG TGACGGTCAC CGCCTTTGAT TTTCTGGCCA ACCGGCCGGT CACGGTGAAG
GCCGATGTGC TGGCCCTGTC CACCGGCCTG CGACCCCATC CCTCCACCGA GGAGGTGGGC
CGACGGTACA AATTGACCTG CAACCCGGAC GGCTATTTTC TTGAGGCCCA TGTCAAGCTC
CGGCCCGTGG ACTTCCCCAG CGAGGGACTT TTTGTGGCCG GCCTGGCCCA CGCCCCCAAA
AACCTGGACG AGACCGTCAG CCAGGCACTG GCCGCCTCGG GCCGGGCCGG GGTCCTGCTC
TCCCACGACC GGCTCTCTGT TTCAGGCATC ATCTCGAAAC ACAACCGGGA CATCTGCATG
TCCTGCCTGG CCTGTTTCCG CGTCTGTCCC TTTGACTCGC CTTTTATCGA CGAAGAAGGG
CACATCAGCC ACAACGAGGT CAAGTGCATG GGCTGCGGCA TCTGCGCCGG GGTCTGCCCG
GCCAAGGCGT TCCAGGTCAA CAACTTCAGG GATGACCAGA TTATCGCCAT GATCGACGCG
ATAAGCTGA
 
Protein sequence
MSQNSKPSGS VMIVGGGIGG MQAALDLADS GFKVHMVQKD SSLGGTMVML DKTFPTGDCS 
MCMISPKMVE IGRHPNIEIH TLAEVTAIDG EPGRFTATVK LLPRYVDPDK CTGCGICEKK
CPKLVTSEFE QGLTKRKAIY SLLAQAVPNT RVIDYDNCLY FQRGRCKACE KFCTAGAINF
EDTGKEISLT VGAVILSPGL ARHSAARHPE LGFGRWPNVV SSVQFERILS ASGPFSGQIL
RPGDKKHPHK IAWIQCVGSR DTNHGNPWCS SVCCMYATKQ AVIAREHDAS VQPTIFYMEM
RAFGKDFDKY VDRAKNQYGV RYHRAMVSAV HEDADTGNLV LRYAEMDGTI TEETFDMVVL
SIGLEPHADA LEFAKTFNIE SNRHGFAATT PFAPVDTTRP GVFVTGTFQG PKDIPETVIQ
GSAVAGKAMA LLGEARGTEI TEKALPPETD TTGAEARIGV LVCHCGINIS QTVDIPAVVE
TAKTLPNVVF ADDLMYACSQ DSQEAIKALV QEHNLNRVVV ASCTPRTHQP LFQETIRDAG
LNKYLFELAD IREQCSWCHM GQNEPATKKA IDIVKMTVAK VKLFEAIHTD SVPVTPAAMI
IGGGIAGMTA ALALGDQGYE VHIVEKTSAL GGLVKNVYRT LDGRDVQSFL TDCIQKVEQH
PKVTVHTGTD IKKTDGFVGN FVTTLSDGAA ISHGAIIVAT GGVEYAPVEY EYGNSSSIVT
QRELEKRLET ETFSPTAAFA MIQCVGSREE PFNYCSRICC QDAIKNAIAI KKKYPKAGVT
IFYRDIRTYG LREDYYQEAR SLGVLFVRFE PENKPEVRVD GDRVTVTAFD FLANRPVTVK
ADVLALSTGL RPHPSTEEVG RRYKLTCNPD GYFLEAHVKL RPVDFPSEGL FVAGLAHAPK
NLDETVSQAL AASGRAGVLL SHDRLSVSGI ISKHNRDICM SCLACFRVCP FDSPFIDEEG
HISHNEVKCM GCGICAGVCP AKAFQVNNFR DDQIIAMIDA IS