| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1149 |
|---|
| Symbol | |
|---|
| ID | 5693983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1366976 |
|---|
| End bp | 1367368 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641263742 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001529032 |
|---|
| Protein GI | 158521162 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTTG AAAGCAAAAA GGTCGTGCTG GTGGTGGATG ACGAGGCCGA TTTTGCCTTC
ATTGTTCAGA AAAATCTGAA ACAGCAGGGT TTTGTTGTCG AGGTCGCCTA TGACGGCGCC
GAGGCCCTTG AAAAAATTCG AAACGACCCG CCGGACGCAG TGATTCTTGA CGTGATGATG
CCGGAAAAGA CCGGCTACGA GGTGTGCGCC GAACTCAAGA AAAACAAAGC GCTGGAGGCC
ATTCCCGTGA TTCTTCTGAC CGCGGTGGCC GACCATGTAT CTTCCACCCG ATATTCCCAC
CACCATGGTA TCACCACGAT GGCCGACGAC TATCTGCCCA AGCCGTCCTC CATCGAAGAC
CTGCTGATCC GCCTGCGCCG GCTGGTGGAA TAA
|
|---|
| Protein sequence | MALESKKVVL VVDDEADFAF IVQKNLKQQG FVVEVAYDGA EALEKIRNDP PDAVILDVMM
PEKTGYEVCA ELKKNKALEA IPVILLTAVA DHVSSTRYSH HHGITTMADD YLPKPSSIED
LLIRLRRLVE
|
|---|
| |