| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1138 |
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| Symbol | |
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| ID | 5693972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1352718 |
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| End bp | 1353755 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641263731 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001529021 |
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| Protein GI | 158521151 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGAG CATTTTTAGC GCTTTCCGGG TATTTTGTTA TCTTCCTTGC CACCCTGATC
TGTCATTCCG GGGGGGCGAC CAATCATATT ACACTGAATG GTATTTTTCT GCTGTTTCTG
TCCCTGCTGG TAATCTATAC CGGCATTTTT TTCATGATTT ATTCAGGGGC AAACCGTAAA
TTCAAAGACC CCAGCCTGAC CGTCTTTCAA TTGTCCGTCG CCATCTGCTG GGCCGCGGTG
ATGGCTTACT TCACCGGTCC GAACATCCGG GGCAGTATCA TCACGATCTA TATTCTGATG
TTTATGTACG GTATTTTCCA GTTGCGGTTT CGCGCCTTTC TCGCCCTCGT CGCCATGGCG
GTCACGCTGT ATGTTTTTTC CATGATGCTG CTTTATCGAA ACCATCCCGA ATCGATTGAC
GTGATGACGG AAATTATCCG TACCATGATC CTGTTTATCG CCTTGCTGTG GGTCTCATAC
ATATCCACCT ATGTTTTCAG GTTAAGGCAA AAGGTCAAGC TGCTGGCAAC GCGCGACCCC
CTGACCAATG TTTACAACCG GCGGGAAATT CTTGAAATCC TAAAACGGGA AAAATCGTTT
TCAGACCGCG CCGGATCACC GTTTACCCTC TGCATCCTGG ACCTTGATGA TTTTAAAAAC
GTCAATGATA TATACGGGCA TCAGGCCGGG GATACGGTTT TAAAAGCGTT TGCCCGAACG
ATCCGAATGA ACATTCGGAC AGAGGATTAT CTGGGCCGTT ACGGAGGCGA GGAGTTCTTT
GTTATTTTTG TGAGCAGTGA CTGCAATGAC TGCAACCCCG CCTGTGTGGA GCGCCTGCTG
TCGGCCACGC GGCAACTCTC TTTTCCTGAA ATCGACAGGA ACCTGCGGAT CACCGTATCC
ATCGGCGTCA CGGCTTATGT CCAGACCGGT GTTTCGATTG ACACGCTGAT CTCCATGGTG
GATGAAGCCC TTTACAGGGC CAAGGCCGCT GGAAAGGACA GGGTTGAATA CAGCAAACCC
TTGGCATACA AGGGCTAA
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| Protein sequence | MRRAFLALSG YFVIFLATLI CHSGGATNHI TLNGIFLLFL SLLVIYTGIF FMIYSGANRK
FKDPSLTVFQ LSVAICWAAV MAYFTGPNIR GSIITIYILM FMYGIFQLRF RAFLALVAMA
VTLYVFSMML LYRNHPESID VMTEIIRTMI LFIALLWVSY ISTYVFRLRQ KVKLLATRDP
LTNVYNRREI LEILKREKSF SDRAGSPFTL CILDLDDFKN VNDIYGHQAG DTVLKAFART
IRMNIRTEDY LGRYGGEEFF VIFVSSDCND CNPACVERLL SATRQLSFPE IDRNLRITVS
IGVTAYVQTG VSIDTLISMV DEALYRAKAA GKDRVEYSKP LAYKG
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