Gene Dole_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1110 
Symbol 
ID5693944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1322680 
End bp1323306 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID641263704 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_001528994 
Protein GI158521124 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGT TTGCAAATAT GACGGAAGCG ATTCTGGCCG GTGATCCGGA CAGGGTAAAG 
CAGCTGGCCG AAGAAGGGAT CAGCAGGGGC GACGATGCCG GGGCCGTGAT GGCGGCCATG
ATCGGGGCCA TGGATATCGT GGGCGAGAAG ATGGAAGCGG AAGATATGTT CATTCCCGAG
GTGCTGATGT CGGCAAAGGC CATGAGCGCG GGCACCGAGT TGCTCAAGCC CCACCTGGCC
GAAGGCGGGG ACGGTAACAA GGGCACCCTG GTGATCGGCT CCGTGCACGG CGACCTGCAT
GACATCGGCA AAAATCTGGT CAAGATGCTC ATGGAAGGGT CGGGTTTTTC CGTGGTGGAC
CTGGGCACCA ACGTGGCGCC GGACGCTTTT CTGGCCGCGG TAAAGGAACA TTCGGCCAGC
CTGGTGGGCA TGTCGGCCCT GCTGACCACC ACCATGCCGG TGATGAAGGA GGTGGTGGAC
GCCCTCAAGA ATGCCGGGCT GCGGGACCAG GTCAAGGTGC TGGTGGGCGG CGCTCCGGTC
ACCGATGCGT ATGCCGAGCA GATCGGGGCC GACGCCTATG GCGCGGACGC CGGATCAGCG
GTGCGCATCG CCAAGTCCCT GGTGTAA
 
Protein sequence
MTQFANMTEA ILAGDPDRVK QLAEEGISRG DDAGAVMAAM IGAMDIVGEK MEAEDMFIPE 
VLMSAKAMSA GTELLKPHLA EGGDGNKGTL VIGSVHGDLH DIGKNLVKML MEGSGFSVVD
LGTNVAPDAF LAAVKEHSAS LVGMSALLTT TMPVMKEVVD ALKNAGLRDQ VKVLVGGAPV
TDAYAEQIGA DAYGADAGSA VRIAKSLV