Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1110 |
Symbol | |
ID | 5693944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1322680 |
End bp | 1323306 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641263704 |
Product | cobalamin B12-binding domain-containing protein |
Protein accession | YP_001528994 |
Protein GI | 158521124 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGT TTGCAAATAT GACGGAAGCG ATTCTGGCCG GTGATCCGGA CAGGGTAAAG CAGCTGGCCG AAGAAGGGAT CAGCAGGGGC GACGATGCCG GGGCCGTGAT GGCGGCCATG ATCGGGGCCA TGGATATCGT GGGCGAGAAG ATGGAAGCGG AAGATATGTT CATTCCCGAG GTGCTGATGT CGGCAAAGGC CATGAGCGCG GGCACCGAGT TGCTCAAGCC CCACCTGGCC GAAGGCGGGG ACGGTAACAA GGGCACCCTG GTGATCGGCT CCGTGCACGG CGACCTGCAT GACATCGGCA AAAATCTGGT CAAGATGCTC ATGGAAGGGT CGGGTTTTTC CGTGGTGGAC CTGGGCACCA ACGTGGCGCC GGACGCTTTT CTGGCCGCGG TAAAGGAACA TTCGGCCAGC CTGGTGGGCA TGTCGGCCCT GCTGACCACC ACCATGCCGG TGATGAAGGA GGTGGTGGAC GCCCTCAAGA ATGCCGGGCT GCGGGACCAG GTCAAGGTGC TGGTGGGCGG CGCTCCGGTC ACCGATGCGT ATGCCGAGCA GATCGGGGCC GACGCCTATG GCGCGGACGC CGGATCAGCG GTGCGCATCG CCAAGTCCCT GGTGTAA
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Protein sequence | MTQFANMTEA ILAGDPDRVK QLAEEGISRG DDAGAVMAAM IGAMDIVGEK MEAEDMFIPE VLMSAKAMSA GTELLKPHLA EGGDGNKGTL VIGSVHGDLH DIGKNLVKML MEGSGFSVVD LGTNVAPDAF LAAVKEHSAS LVGMSALLTT TMPVMKEVVD ALKNAGLRDQ VKVLVGGAPV TDAYAEQIGA DAYGADAGSA VRIAKSLV
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