Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1094 |
Symbol | |
ID | 5693928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1298905 |
End bp | 1300686 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641263688 |
Product | TrkA domain-containing protein |
Protein accession | YP_001528978 |
Protein GI | 158521108 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00281936 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTTG ACCAAACCGT TGTGTTTGCC GTGCTGCTGG TGACCCTGAT CTTTTTTGTG TGGGGCCGGT GGCGGTATGA CATTGTTTCC CTGGGTGCCC TGCTGGCGAT CTTTGCCGCC GGGCTGGTGC CCGGAGACGA GGTGTTTGCC GGGTTCGGCC ATCCGGCGGT GATCACGGTG GCGGCCGTGC TGATAATCAG CCGGGGCCTG CTCAACGCCG GAGTGGTGGA GAGCATCTCC CGGCTGCTGG AAAAGGTGGG CAACCGGCCC ACCCTTCAGG TGGCGGCCCT TACCGGCATC GTGGTGGTCT GCTCGGGCTT TATGAACAAC GTGGGGGCAC TGGCCCTGAT GATGCCCGTG GCTGTCTGGA TGTCACGCAA AAGCGGGCGC TCCCCTTCCC TGCTGCTCAT GCCCCTGGCC TTCGGCTCCC TGATCGGGGG CCTGATCACA CTGATCGGTA CGCCGCCCAA CATCATTCTG GCCACCTTTC GTACCGAGAC AGGCAGCCCC CCTTTTGGTA TGTTTGACTT TGCCCCCGTA GGCCTGGGTG TGGCAGCGGC GGGCCTGATC TTTATTTCGC TGGTGGGCTG GCGGCTTACG CCCCGGCGGC AGAGCGGCAC CGAGGCGGAT GAACTGTTTG AAATTGACGA CTACATCAGC GAAGTGGTGG TGCCGGAGAC CTCAAAAATG GTGGGCCAGA CCCTCTACCA TCTCTCCCTG GCCATGGAAA AGGACAGGCA GGTTACAATG GTGGCCCTGG TGCGCGGAGA GCGCCATATT CCGGCACCGT CCTGGTACGA GGTGCTGTCC GCCGGAGACA TCCTGGTGGT GCGGGCCGAT GCAGAGGAAC TGCAGTTTCT CATCGATGAG CTGGGCATGG AGCTGGCCGC CAACCGGGAG GCGGACAAGG CGGCCCTGGA GTCCGAGGAT ATTCGCATCA TGGAAGTCAT TGTTTCCCCG GGATCGGCCA TGATCGGCCA TACCGCCATG AGCATGCGGC TGCGGCGCAA TCATGGCGTG AACCTGCTGG CCGTGGCCCG CCAGGGCCAG CGGCTCAAGA CCCGGCTGGG CCAGACCCGG TTTGCCGCCG GCGACATCCT GCTGCTGCAG GGAGGGCAGG AGGCGATCAG CACCTTTCTT TCGGCCATGA GCTGCCTGCC CCTGGCCCAG CGCGGTTTTC ATCTTTCCCG GCCCCGGCAG GTGGTGATGG CCGTGACGAT TTTCGGCGCG GCCATGGCAG CCGCGGCCCT GGACCTGGCG CCGGTGCAGG TGGCCTTTGC CGGGGCCGCG CTGATCATGG TGGTGACCGG CCTGATTCCA TTAAAGGAGA TTTATGAAAG CGTGGACTGG CCCATCATCA TTCTGCTGGG GGCGCTGTTT CCCCTGGGAA CGGCCCTGGA GACCACGGGC GGGGCCCAGC TGATCGCCGA CAGGCTGGTG CTGCTCTCCG GCCGGTTTCC GCCCTGGGCC GTTCTGGCCG TATTGATGGC CGGCACCATG CTGCTTTCCA ACGTGATCAA CAACGCCGCG GCCGCCGTGC TGATGGCCCC CATCGCCCTG AGCCTGGCCC ATGGCATGGG CGTGTCCGCC GATCCGCTGC TCATGGCCGT GGCCGTGGGC GCCTCCTGCG CTTTTCTGAC GCCGGTGGGC CACCAGTCCA ACGCCCTGGT GATGGCGCCC GGCGGCTACC GGTTCGGCGA TTACTGGCGC ATGGGCCTGC CCCTCTCCGT TATCGTGATG GCCGTGGCCG TGCCCCTGAT CGTGATGGTG TGGTCTTTTT AA
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Protein sequence | MTLDQTVVFA VLLVTLIFFV WGRWRYDIVS LGALLAIFAA GLVPGDEVFA GFGHPAVITV AAVLIISRGL LNAGVVESIS RLLEKVGNRP TLQVAALTGI VVVCSGFMNN VGALALMMPV AVWMSRKSGR SPSLLLMPLA FGSLIGGLIT LIGTPPNIIL ATFRTETGSP PFGMFDFAPV GLGVAAAGLI FISLVGWRLT PRRQSGTEAD ELFEIDDYIS EVVVPETSKM VGQTLYHLSL AMEKDRQVTM VALVRGERHI PAPSWYEVLS AGDILVVRAD AEELQFLIDE LGMELAANRE ADKAALESED IRIMEVIVSP GSAMIGHTAM SMRLRRNHGV NLLAVARQGQ RLKTRLGQTR FAAGDILLLQ GGQEAISTFL SAMSCLPLAQ RGFHLSRPRQ VVMAVTIFGA AMAAAALDLA PVQVAFAGAA LIMVVTGLIP LKEIYESVDW PIIILLGALF PLGTALETTG GAQLIADRLV LLSGRFPPWA VLAVLMAGTM LLSNVINNAA AAVLMAPIAL SLAHGMGVSA DPLLMAVAVG ASCAFLTPVG HQSNALVMAP GGYRFGDYWR MGLPLSVIVM AVAVPLIVMV WSF
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