| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1093 |
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| Symbol | |
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| ID | 5693927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1293424 |
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| End bp | 1298589 |
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| Gene Length | 5166 bp |
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| Protein Length | 1721 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263687 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001528977 |
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| Protein GI | 158521107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG AACCGACTTC AGACAACAGG CAAACCCTTT CAACCAGGCC GCCCGGAGAG
GCCGGTCCTG GCACCGGCAT GGTTATCGCA ACGGTGATGC TGCTTGTTGC CGGTGTCGCG
TTTACCGGGT GGACAATCCA GCGCGCCGAT CAGGCCATGC GGCGCGATCT GCTGCAAAAG
GCCCAACAGA TCGCGAACTT CGTCAATGTA AAAAACATCA TGGCGCTTTC CGGCACAAGT
GACGACAAAG ACCATCCGAT ATACAAAAGA CTTCAGCAAC AGCTCAACAC GGTCCGCGCC
GCGGCCGGAT ACCGATACCT GTACCTGATG GGAAGGAATT CGGGAGAGCA AAAAGAGCGA
CCGACGAAAA TCTTTTTTCT TCTGGACACT CAGGATGACC GGCTGGAAAC CGATACCGCC
TGTGGCCCCG GTGAACCTTA CGAAGAGGCG GCGGAGGACC TGATTCATGC CTTTCGAACG
GGTGTGCCCG TGGTGGAAGG TCCTGTCAGC GACCGGTGGG GCACATGGGT GTCCGCCCTG
GTTCCCCTGT TTGATCCCGG CCAGACGGTA TACGACTCCG CGCTTCCGTC CGATGCCAGG
GACCTGATAC AAAAGGCCGT GGATTTTTAC CACGCCCATG GCCGGGACCG GCTGCTGGAG
GAAATGAGAA AAAAGAACGG GCTCTTTCAC CATGGCGATC TGTACGCTTT TGCCTATGAC
CTGGACATGA CGTTCGTGGC CCACCCGGTC AAACCCAGCC TGGTGGGGCA AAACTGGATC
GATAAGAAAG ATCGCCCCGG CGGCCGTTAT TTCCGGCGGG AAATTCAAAA AACGGCTCTT
TCCAAAGGTT CGGGCTGGGT CGATTATGAA TATGAAAACC CCGTCAATCG ACAGATCGAG
CCGAAAACCA CCTTTGTTCA GCGGCTGGAC GATCTCATCC TCTGCGCCGG TGCCTATACG
GGAACCGGAA GCGTTGTGGC GGTCCTCGGC ATGGACGTGG ACGCTCACGA CTGGAAAATG
ATGCTGCTCC GGGCCGGCCT TCCGCCTGCC CTGCTGACGC TGGCACTGGC GGCCATCCTG
CTGACCGGCC ATATATTGCT GACGCGACGA TCCCGGCAGG TCACCCTGCC GCCGTTATGG
ATGCAGTCTC TTGTCCCGGT GCTGGTAATA GCAACAGGCC TGGTTCTGAC GATGTTCGCG
GCATGGACGG CCCACCAGGC GGAAGAAAAG GCCCGCGGAG AGATATTCTC GCGACTTGCC
GCAAGCCGGG CAAATGCCCT TGCGGTCTCA CTTCACAAAC TTCGGGATAC CGAGCTGGAG
GGGCTGGCCG GTTTCATGGA ACGGCCCGGC GATATCACCG AAGCGGACTT CCGCCGCTAC
GCTTCATACC TGGAAAAGAA CCCGACCGTC CTTACCTGGG TGTGGACACC GGCGGTGCCG
GCGGAACAGA AAGCCGCTTT TGAAAACCGT GCGCGAAAGG CCGGGATGAA GGATTTTACC
GTCTGGCAGC AGAACGCCGA CGGCAAAAAG ATGCCGGCCA CAGGCCGGGA TATTTACTAC
CCCGTTCTGT TTATGGCCCC GCTGGCGGGA AGTGAAAGTG TACCGGGTTT TGATATCGGT
TCTGAACCGT TGCGCCGGAA GGCCCTTGAG ACATCAATCC GCACCGGCCT GTCCACCGCC
TCCGACCCCA TCACTCTGGT GCAGGAGACC GGGGGGCAGA AAGGGCTGCT GGTTGTCCAT
CCCGTTTTTC GCGGCCCTCC TTCCGACACG CCGAACGGAT TTGTCGTCGC CGGTCTGCGC
ATGGGCACGC TGCTGCAAAA TGCCGTCCAG GAGCGGCCGG CCGTGGTCGA CATGGCCCTT
CTCGACCGAT ACGGCCAGCC ACAACGCCTT GCCGCGATCC AGGCCAACGA GTTGCCCTCT
TCCACCGGTC TTGCGGTGAC CTACTTTATG CCCATGCTGG GCAAGGTGTT TTCCGTCACC
GTTTATCCGG ATGCCGAATT CGTCAAGCTT CATCCGGCCA GGGCGGGCCT GGCCGCCGCC
TTCACCGGCC TGCTGCTGAC CGCCGCTGTA ACGCTGGTGA TGGTCGGCTA CATTCGACGC
CGCAGGCAAC TGGAAGGGCT GGTGGCCCAG CGGACCCGCA GTCTTCGTGA AAGTGAGAAA
CGCTATGCCC AGATCGTGGA AAACGCCAAC GACACGATAT TCACCACCGA CGAAAACGGC
CGTTTTTCCT TTGTCAACCC GGTGGCGCAA AAAATCAGCG GATACGACGA AACAGAACTT
TTAGGCCGCC ACTTCACCAT GCTGATTCCT CCGGAACACC ATGAGGCGGT GGCCCGTTTT
TACGGCATTC AATTCACGGA AAAAACACCG AACACCTACT ACGAAATGCC GATGCTGCGA
AAGGACGGAA AGCGCGTCTG GCTCGGGCAG AATACGGGAC TGATCTTGAA AAACGGCCGG
GTCGCGGGTT TCCAGGTTGT TGCCCGCGAC ATCACCGACC GCAAACAGGC AGAAGCGGCC
CTGCGGGCAG AGGTGATGCG CAATCGAACC ATCACCGGCA CGGCCCAGGA TGCGATTGTC
ATGATCGACC CGAAGGGCGA TATCTCTTTT TGGAACCCGG CAGCCGAGCG GATGTTCGGT
TATACGGGCC AGGAGGCACT TGGACAAAAT CTCCACCGGC TGCTGCCCCC ACAACGATAT
CATGCGGCTC ATTTAAAGGC GTTTCTCCAG TTCCAGCAGA CCGGTATGGG CGATGCGACT
GGGAAGACCC TCGAGCTTGC AGCCCTCGAC AAGGACGGAC GAGAATTCCC GATTGAATTG
TCGTTGTCCG CACTGCGGCT TGACGACGGC TGGCATGCCG TGGGCATCAT GCGTGATATC
ACCGATCGCA AGCGGGCCGA GGACAAGCTG CGTAGCGCCC ATGAACGCAT TCACGCGCTG
ATGGAATCGG TCCAGGCCGG AATCATCCTG GTGCGCAAAA GCGACCGGGT GATCGTCGAG
GCCAATCCTG CCGCGGCCCG TATCGCCGAC GTTTCAGTCG ACGCCCTGGT CGGAACGCCC
TGCCAGGAGC ATTTCTGCCC GGCCGAAATA GGTCGCTGTC CGGTTTTCGA TCTGGGGCAG
GAAGTAGACA ACTCTGAACG GTCCGTGTAC CGCGCGGATG GAAAACACGT GCCTATTTTA
AAAACCGTCA CATCCTTGTC CCTGGACGGC GAGGACTATC TGCTGGAAAG TTTTGTGGAT
ATTACGGACC TCAAGCGGGC CGAGGAGGAG CTGCGGTTTC AAACCCGTCT GCAGGAGCTG
CTGACCGAGA TTTCGACCAC TTATATCAGC CTGCCCCTGG ACCGCATGGA CGTGGCGGTT
GAGAACTCGC TGGGGGAAAT GGGCATCTTT GTCGGCGCGG ACCGGGTTTA CCTGTTTGAC
TATGATTTTG AAAAACAGGT CTGCAACAAC ACCCATGAAT GGTGCGCGGC CGGAATTGCG
CCGCGGATCG ACACGCTGCA GGCGATTCCG TTTAGCGCCA TACCGCAATG GGTGAATGCC
CACCGGCAAG GCAAAACGCT GTACATCGAC GATATAAAGG CCTTGACGCC GGAGGACGGC
GTCCGCCGTC TGCTGGAGCC GCAGGGCGTT CAAAGCATGA TTGCCGTTCC CCTGATGGAT
AATGAACGCT GCCTGGGCTT CGCCGGTTTT GATTCCATCA GTGCCCTCCG CCACTATTCG
GATGCCGAAA AAAAATTGCT GACGGTGTTC GCGCAAATGC TGGTGAACAT CCGTAAACGG
CACGAAATCG AACAGTCGCT GCACCAGGCC ACCCAACGGG CCAGGGCCGC CACGCAGGCC
AAAAGTGAAT TTCTCGCCAA CATGAGCCAT GAAATACGGA CGCCCATGAA CGGTATTCTC
GGCATGACCT CCCTGCTCCT TGAAACGGAA CTGACCGGAG AGCAGCGCCG TTTCGCCGAA
ATCGTCCGCA ACAACGGAGA CGCGCTTCTG GAGATCATCA ACGACATTCT TGATTTTTCC
AAAATCGAGG CGGGCAAACT GGAACTCGAG ATGGTCGATT TCAGCTTGAA TAAACTGCTG
GAAGGGCTGG CCGGCGCACT CAGCGTTCAG GCCCACAAAA AAGGGATCGA ACTCATTTAT
GACATCGAAC CCGGCACACC GTCTCATGTG CGCGGCGATC CCGGCCGCCT GCGACAGATA
CTTGCCAACC TCATGGGAAA CGCGATCAAG TTTACGGAAA AGGGAGAAGT GTTCGTTCAG
ATAAAAACTG GAGAAGCAGT TGCGGCGGAT ACTGTTGCCG AAACCGAGGC CGGCGCACCG
GACGTTAAAT CAACCGAACC GGAGGTGGCG GTTTCCGTGT CCGACAATGA CGCTCCTGCC
GTGACGCTTC TCTTTTCCGT GAAAGATACC GGCATCGGCA TTTCTCCGGA AAAAATCGAG
ACGATCTTTG AATCGTTCAC TCAGGCCGAT TCGTCCATAA CCCGAAATTT CGGAGGGACC
GGCCTGGGCC TGACCATTTC ACGAAAACTG GCCGGCATGC TGGGCGGCAA GCTGTGGGTA
ACCAGCAATC CGGGCGCGGG CAGTACCTTT GCGTTCACGG CCCGGTTCGA GGCTCCAGAA
GAAGCGGTTG TGGCGCTTGA AGAACATCCC CCGTTGGATT TGGACCGGGC CCGCATACTG
GTGGTGGACG ACAACGCCAC CAACCGGCTG ATCCTGAACC GCACGCTGAC CGGATACGGC
GCCTCGGTGA CGGAGGCGGA CAGCGCCATA CGCGGGCTTT TTGAATTCAG GCGGGCGGCT
GACGAGGGAA ATCCGTTCCG GCTGGCGCTT ATCGACTGCC GCATGCCCGG CATGGACGGA
TTCGGGCTGG CCGAAAGAAT GCACAAAGCG CCGGTGCGCA CCGGGACAAC GGAAATCATG
ATGCTCACGT CAGACAACAG AAGCGGAGAC CTGGAAAAAT GCCGAAACCT CGGGATCTCC
CGTTATCTCA TCAAACCCAT CAGCCGCAAG GACATCCTGG ACGCATCGCC GCCGTCCTGG
GCGGTAAAAC CGTGGCCGCA GACGACAGGA TCGCCGAGCC GGCCCTTCCG TCGACGCTTC
CCGCCGCACG CATCCTGCTG GTGGAGGATT CAGCGGACAA CCGGCTTCTC GTGCAGACAT
ACCTGA
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| Protein sequence | MNLEPTSDNR QTLSTRPPGE AGPGTGMVIA TVMLLVAGVA FTGWTIQRAD QAMRRDLLQK
AQQIANFVNV KNIMALSGTS DDKDHPIYKR LQQQLNTVRA AAGYRYLYLM GRNSGEQKER
PTKIFFLLDT QDDRLETDTA CGPGEPYEEA AEDLIHAFRT GVPVVEGPVS DRWGTWVSAL
VPLFDPGQTV YDSALPSDAR DLIQKAVDFY HAHGRDRLLE EMRKKNGLFH HGDLYAFAYD
LDMTFVAHPV KPSLVGQNWI DKKDRPGGRY FRREIQKTAL SKGSGWVDYE YENPVNRQIE
PKTTFVQRLD DLILCAGAYT GTGSVVAVLG MDVDAHDWKM MLLRAGLPPA LLTLALAAIL
LTGHILLTRR SRQVTLPPLW MQSLVPVLVI ATGLVLTMFA AWTAHQAEEK ARGEIFSRLA
ASRANALAVS LHKLRDTELE GLAGFMERPG DITEADFRRY ASYLEKNPTV LTWVWTPAVP
AEQKAAFENR ARKAGMKDFT VWQQNADGKK MPATGRDIYY PVLFMAPLAG SESVPGFDIG
SEPLRRKALE TSIRTGLSTA SDPITLVQET GGQKGLLVVH PVFRGPPSDT PNGFVVAGLR
MGTLLQNAVQ ERPAVVDMAL LDRYGQPQRL AAIQANELPS STGLAVTYFM PMLGKVFSVT
VYPDAEFVKL HPARAGLAAA FTGLLLTAAV TLVMVGYIRR RRQLEGLVAQ RTRSLRESEK
RYAQIVENAN DTIFTTDENG RFSFVNPVAQ KISGYDETEL LGRHFTMLIP PEHHEAVARF
YGIQFTEKTP NTYYEMPMLR KDGKRVWLGQ NTGLILKNGR VAGFQVVARD ITDRKQAEAA
LRAEVMRNRT ITGTAQDAIV MIDPKGDISF WNPAAERMFG YTGQEALGQN LHRLLPPQRY
HAAHLKAFLQ FQQTGMGDAT GKTLELAALD KDGREFPIEL SLSALRLDDG WHAVGIMRDI
TDRKRAEDKL RSAHERIHAL MESVQAGIIL VRKSDRVIVE ANPAAARIAD VSVDALVGTP
CQEHFCPAEI GRCPVFDLGQ EVDNSERSVY RADGKHVPIL KTVTSLSLDG EDYLLESFVD
ITDLKRAEEE LRFQTRLQEL LTEISTTYIS LPLDRMDVAV ENSLGEMGIF VGADRVYLFD
YDFEKQVCNN THEWCAAGIA PRIDTLQAIP FSAIPQWVNA HRQGKTLYID DIKALTPEDG
VRRLLEPQGV QSMIAVPLMD NERCLGFAGF DSISALRHYS DAEKKLLTVF AQMLVNIRKR
HEIEQSLHQA TQRARAATQA KSEFLANMSH EIRTPMNGIL GMTSLLLETE LTGEQRRFAE
IVRNNGDALL EIINDILDFS KIEAGKLELE MVDFSLNKLL EGLAGALSVQ AHKKGIELIY
DIEPGTPSHV RGDPGRLRQI LANLMGNAIK FTEKGEVFVQ IKTGEAVAAD TVAETEAGAP
DVKSTEPEVA VSVSDNDAPA VTLLFSVKDT GIGISPEKIE TIFESFTQAD SSITRNFGGT
GLGLTISRKL AGMLGGKLWV TSNPGAGSTF AFTARFEAPE EAVVALEEHP PLDLDRARIL
VVDDNATNRL ILNRTLTGYG ASVTEADSAI RGLFEFRRAA DEGNPFRLAL IDCRMPGMDG
FGLAERMHKA PVRTGTTEIM MLTSDNRSGD LEKCRNLGIS RYLIKPISRK DILDASPPSW
AVKPWPQTTG SPSRPFRRRF PPHASCWWRI QRTTGFSCRH T
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