Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1081 |
Symbol | |
ID | 5693915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1278372 |
End bp | 1279562 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641263675 |
Product | diguanylate cyclase |
Protein accession | YP_001528965 |
Protein GI | 158521095 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATC CTGATAAAAA CAATTCTTTA ACGCCGGCAA CCGAAGGCTC GATTGAGCAC AGCTGGCTGT CCAATCCCCT GGACTGGCCC CACATTGACC GTATGATACT GCTCGTCCTG CTGGTAATGT TCTCCCCGGT CTTCATTGGC GGGGTGCTTC TGGTCGCCTA TCTTGTTTCG CCCGAATGGT TTGACAGGTC GATCGTCATT GCATTGCTGT CACTGTATGG GTTTGTCTTC GTACTGCTAC TCTACTTCAT CCTGGCGGCC TTTCACCGGC GCCGGCAAAA ATCCAGCTGG CCACTGATGG AAAACATTAT GTTCGGCTCT TATGTCGTCA TCGTTTGTGC CGGGTCCTGG TTCACCGGAA CGTATTACAC CTTCGGCGCG CTGTTTCTTT TTTTTGGTGC CAGCATTTCT TCTTCGCTGG CGGATATCCG TAAAGTTCGG CTGGCATATT TGGCTTCCTT CGGGGCGCTG GTTGCCTTCA TCGTTATGGA CAGCAGCGGG ATGTTTCGCC ACGCGCCGCT CTTCACTCGC ATTCCGCTTC ATCCGGACGG ATCGCCGCTA CCGGTCTGGT TCGGCGTGCA GGTGTTTATA ACGGTTTCCC TGACAATTAT GCTTTATATC ACCATCGTGA CTTTCAAGCG CTGGGGCGTC CGGGAAGACG TCTACCGAAA AATGTCCACA GTTGACGGGC TGACCCGACT GACCAACCGC AGAACCTTTA TTGAACGCAG CGAAAAAGAG TTGTCCAGCG GCCAGCGACG CCCATCGTCC CATATTTCCT GTATCATGAT AGACATCGAT CACTTCAAGG CCATAAACGA TACTTACGGC CATGCTGCCG GTGACAAGGT GCTGGTAAAA ATCGCGACGA TCCTGACGGA AAAGGCCCGG CCAACCGACG AGGTCGGCCG CTACGGCGGG GAGGAGTTCG CGATGCTGCT GCCAGCCACA ACACTGGCCG GCGCGGTCAA GGTGGCCGAG CGTCAGCGGG CCAGTATCGC GAATGCGGAA ATTATTGTCG ATGGCAATAT CATCCAGGTA ACCGCCAGTT TTGGTGTCGC CAGTTGCCCT TCAGACGATA TTGATAATAT CAACGAACTG CTTAAGACGG CCGATGTAGC CCTTTACGAG GCCAAGCGGG CCGGACGTAA CCGGGTTGTG GCCGCGGCCG GTGAAAAATA G
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Protein sequence | MADPDKNNSL TPATEGSIEH SWLSNPLDWP HIDRMILLVL LVMFSPVFIG GVLLVAYLVS PEWFDRSIVI ALLSLYGFVF VLLLYFILAA FHRRRQKSSW PLMENIMFGS YVVIVCAGSW FTGTYYTFGA LFLFFGASIS SSLADIRKVR LAYLASFGAL VAFIVMDSSG MFRHAPLFTR IPLHPDGSPL PVWFGVQVFI TVSLTIMLYI TIVTFKRWGV REDVYRKMST VDGLTRLTNR RTFIERSEKE LSSGQRRPSS HISCIMIDID HFKAINDTYG HAAGDKVLVK IATILTEKAR PTDEVGRYGG EEFAMLLPAT TLAGAVKVAE RQRASIANAE IIVDGNIIQV TASFGVASCP SDDIDNINEL LKTADVALYE AKRAGRNRVV AAAGEK
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