| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1045 |
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| Symbol | |
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| ID | 5693880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1231217 |
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| End bp | 1232446 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641263642 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001528932 |
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| Protein GI | 158521062 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTCT ATGAATACAG CGCCCTGAAT GCCGGCGGCA AGACCGTGTC CGGCATCATT
GATGCCGACG GTGAGACCGC GGCCCGGGAA AAGCTGCGCG GCCAGCAGCT GTTCCCTGTT
GCCATTGCGG AGGCTTATGA CCGCAGGGAA CAAAAGGCCG GGGGTAGATG GCCGGAAGGG
CTGCGCCTTT TTTCCGGTAT TGGAAAAGGC GAACTGGCCA CGGCCACGCG ACAGCTGGCC
ACCCTTGTGG GCTCGGGCTT CCCCCTTGTT TCGGCCATCT ATACGCTTAT TCCCCAGGCC
GGCTCCGCGG CCCTGAAAAA GGCGCTCTCC CGCATCAAGG AATCGGTGGA GGAAGGCAAC
AGTTTTGCCG ATGCCCTGGC AGGATTCCCC GACATCTTCT CACCCATCTA TATCAACATG
GTCCGGGCCG GTGAGGCCTC CGGCACACTG GAAGTCGTGC TGGAGCGGCT GGCCGATCTG
CAGGAGACCC AGCAGGCACA GCGCAACCGC ATCACCGCCA TCCTGGCCTA CCCCCTGGTC
ATGACCGTAC TGGGAAGCGG GGTCCTGGTT TTTCTTCTGG TCAAAATCGT GCCTCAGCTG
GTCTCGGTTT TTGAAGACAT GAATCAGGTG CTCCCCGTTC CCACGCGGAT TGTCATCGCC
ACCAGTGACT TTCTGCAATC CTACTGGTGG GTGTTGCTGG CAGCCGGGGT CGCTCTCTTT
TTGGCCCTTC AGAAATTCAG AAAAACCCGG CGGGGCCGCC ATCTATTAGA CACGGCCCTT
CTGCGTGTGC CGGGCTTAAA AAGCCTGGTG CAGAAAATCG CAGTGGCCCG TTTTTCCAGA
ACCCTGGGCT CCCTTCTGGA AAACGGCATT CCCATGCTGA CGGCTCTGGA CATCGTCAAG
AACATCGTTG GCAACACAAT TATTGCCGAC GCGGTGACGG CCGCGGCCAC TGATGTCGAA
AAGGGGGAAG GACTGGGAAG CAGTCTGGAG ATCACAGGGG TGTTTCCTCA TCTCTCCGTA
CAGATGATCA AAGTGGGGGA ACAGAGCGGA AATATTGAGC AGATGCTTCA ACGCACGGCG
GATGTATTTG AAAACGAGGT GGACGCCGCT CTGGTGGGCC TGACGTCGCT GCTGGAACCG
CTGCTGGTGA TTTCCATGGG TATCGTAATC GGATTTATCG TGCTCTCCAT CATCCTGCCC
ATTTTTGAAA TGTACCAGTT TGCCGGGTAG
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| Protein sequence | MPVYEYSALN AGGKTVSGII DADGETAARE KLRGQQLFPV AIAEAYDRRE QKAGGRWPEG
LRLFSGIGKG ELATATRQLA TLVGSGFPLV SAIYTLIPQA GSAALKKALS RIKESVEEGN
SFADALAGFP DIFSPIYINM VRAGEASGTL EVVLERLADL QETQQAQRNR ITAILAYPLV
MTVLGSGVLV FLLVKIVPQL VSVFEDMNQV LPVPTRIVIA TSDFLQSYWW VLLAAGVALF
LALQKFRKTR RGRHLLDTAL LRVPGLKSLV QKIAVARFSR TLGSLLENGI PMLTALDIVK
NIVGNTIIAD AVTAAATDVE KGEGLGSSLE ITGVFPHLSV QMIKVGEQSG NIEQMLQRTA
DVFENEVDAA LVGLTSLLEP LLVISMGIVI GFIVLSIILP IFEMYQFAG
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