Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1017 |
Symbol | |
ID | 5693852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1195966 |
End bp | 1197123 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641263614 |
Product | hypothetical protein |
Protein accession | YP_001528904 |
Protein GI | 158521034 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGACG CCACAGAGAG GCCCACCGCC CGTCTTCGGG TTGATGAAGA CTCTGGCAGC GGTATCACGA TTCATGTCTC AGGCGCCCTG ACCATCGACT CCCACCAATC CCTTTCCGCT GATCTTCATA AAATTCTTGA GCGCCGTCAG GGGGCCTGTC CCATACGTCT GGACCTGGCC GACATCACCA GCGTGGACGA TTTTGGTGTG CTGGCTGTCG AAAACTTCAA AAGCGTTGCC ATACAAAAAG GATGCGGGGT GGTGGTCGTC CAGGTGACCG GGCAGGCGCA ACGACTCTTT CAGCTTTTTT CCGGCATAGC AGATCTGAAT GCGGTGCCTC CCCATGCCTC AGCCAGCCAC GGCCTGCTGG ATGTCATTCC AGAGGTGGGC AATACGGTAA TCGGCGGCAT CAAACGGGTC GACTCCTCCA TCGCCTTTGT GGGGTCCATA CTGTTTGCCT TCATGCGCGC GCTCTTTTCC CCCCGCTCTT TCCGAATGGC CGACACCATT GAACTGATCA GAAGGGACGG CGTAGACGCA ATCCCCATCA TCGGTCTTAT CGGCATCATT ATCGGCCTGA TTTCGGCCTT TGTTTCATCG GTGCAGTTGA CAAAACTGGG AGGCGATATC TATATCCCGG CCATGATCAC CTTTGCCATG GTGGCGGAGA TCGGCCCCAT GATGACCGCC ATCGTCGTTG CCGGCCGCAC CGGTTCCGCC TATGCGGCGG AGATCGGCAC CATGAAAATA TCCGAGGAGG TGGACGCGCT GATTAGCATG GGGTTCGACC CCACCCTGTT TCTGGCAATA CCGCGCATCA CGGCCCTGGT GGTGGTGCTT CCCATTCTCA CCGTCTGCTC GGTGATCTTT GCCCTGCTGG GCGGTCTGGT GGTGTGCGTG ACCCTGCTGA ACCTTCAGAT GGGACCCTAC CTGGAAGGCG TGTCGGACGC GCTTTTCATT GACGATGTGC TGTGGGCCCT TGCCAAAAGC GGCATATTCG CCCTTCTCAT CGCCGTCATC GGCTGTCTTC GGGGATTCCA GGTCCGGGGC GGGGCCGCGT CGGTGGGCGG GGCCGCCACG TCGGCCGTTG TCACCGGCAT CTTCTTTATC ATACTGGCCG ACTCGGTGGT GGCACTGATT CGGCTTTACT GGGGATAA
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Protein sequence | MPDATERPTA RLRVDEDSGS GITIHVSGAL TIDSHQSLSA DLHKILERRQ GACPIRLDLA DITSVDDFGV LAVENFKSVA IQKGCGVVVV QVTGQAQRLF QLFSGIADLN AVPPHASASH GLLDVIPEVG NTVIGGIKRV DSSIAFVGSI LFAFMRALFS PRSFRMADTI ELIRRDGVDA IPIIGLIGII IGLISAFVSS VQLTKLGGDI YIPAMITFAM VAEIGPMMTA IVVAGRTGSA YAAEIGTMKI SEEVDALISM GFDPTLFLAI PRITALVVVL PILTVCSVIF ALLGGLVVCV TLLNLQMGPY LEGVSDALFI DDVLWALAKS GIFALLIAVI GCLRGFQVRG GAASVGGAAT SAVVTGIFFI ILADSVVALI RLYWG
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