Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0972 |
Symbol | |
ID | 5693807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1133683 |
End bp | 1134438 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263569 |
Product | hypothetical protein |
Protein accession | YP_001528859 |
Protein GI | 158520989 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGTGCC ATAAAGTGGA CTATACCCTT ATCGGCGACG TCATGCAGGC CGTGGAAATA GGGCTTGATC CCGGCGAAAC CGTCATTGCC GATGCCGGCA ACATGAACTA CATGAATGAC GCCATCCGGT TTGAGACCCG AATGGGAGAC GGCGCACCGG CGCCGGAAGG GTTACTGGGT TCCCTGGTGG CGGCGGGCAG GCGACTGTTT GCCGGTGAAA ATCTTTTCCT GACCCATTTT ACCAACACGG CGGGCAGCAA ACGACACGTG ACCTTTTCCG GGCCCTGCCC CGGCAGGGTC ATTGTCCTGG ACATGGCCGC CCTGGGCCAG GAAGTGTTCT GCCAGAAAGA GGCCTTTCTC TGCGCCGCCC GCGGCACCCA GGTAAGCATC GCCTTTACCC GGCGCATGGG CCCCGGCTTT TTCGGCCGGG ACGGCTTCGT CCTGATGCGC CTTGTCGGCG ACGGCATGGC CTTTGTGCAT GCCGGGGGCA TGGTGGTGGA AAAAACCCTG AAAAACGAGA CCATCTGCGT GGACACGGGC TGCATCGTGG CGTTCACCTC CGGTATCCAT TACAGCGCAC GACAGGCGGA CAACCTAAAG TCCATGTTCT TCGGCGGCGA GAATCTTTTT CTGGCCACGC TGAGCGGCAC CGGAACGGTC TTTCTCCAGA CCCTTCCCCT TTCCCGGCCG GCGGACCGCA TCCTGCGACA ATTATCGTCT TTTGCCGGCA AACGGAAAGC CGATACCGCG GAATAA
|
Protein sequence | MQCHKVDYTL IGDVMQAVEI GLDPGETVIA DAGNMNYMND AIRFETRMGD GAPAPEGLLG SLVAAGRRLF AGENLFLTHF TNTAGSKRHV TFSGPCPGRV IVLDMAALGQ EVFCQKEAFL CAARGTQVSI AFTRRMGPGF FGRDGFVLMR LVGDGMAFVH AGGMVVEKTL KNETICVDTG CIVAFTSGIH YSARQADNLK SMFFGGENLF LATLSGTGTV FLQTLPLSRP ADRILRQLSS FAGKRKADTA E
|
| |