Gene Dole_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0941 
Symbol 
ID5693776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1097682 
End bp1098671 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID641263538 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001528828 
Protein GI158520958 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.791517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGCCG AAACCCTGCT TACCGTGGAA AACCTGTCGG TCTCCTTTGA AACCGAGGCG 
GGACGGGTGC GGGCCGTGGA CCGCCTCTCT TTTGAGGTGC GGCACGGCGA GGTGCTGGGC 
CTGGTGGGCG AATCCGGGTG CGGCAAAAGC GTGACCGCCC TGTCAATCAT GCGGCTGCTG 
CCAAAACCCT CGGGCCGCAT CGACAGCGGC CGGGTCCTGT TCGGCGGGAC GGACCTTGCG 
GCCCTGCCGC CGGAAGCCAT GCGTTCCATC CGGGGCCGGC GCATTGCCAT GATTTTCCAG 
GAACCCATGA CCGCGTTAAA CCCGGTGCAC ACCATCGGCC GCCAGCTGGA TGAGGCCTAT 
GGCCTTCACC ATCCTGAAAT GGACCGGCCG GCGGTCACGG CCGCCTCCCT GGCCATGCTC 
AAAGAGGTGG GGATTCCCGA TCCGGCCCAG CGCATGGGCC AGTATCCGCA CCAGATATCC 
GGCGGCATGC GCCAGCGGGT CATGATCGCC ATGGCCCTGG CCTGCGGTCC GGACCTGCTC 
ATCGCCGACG AACCCACCAC GGCCCTGGAC GTGACCATTC AGGCCCAGAT CCTGGAACTG 
ATCACCACCA TGCAGCAGCA GAACGATATG TCCGTCATGC TCATCACCCA CGACCTGGGC 
GTGATTGCCG AAACCTGCCA GCGGGTCTGC GTGATGTATG CCGGCACCCT GGTGGAGAGC 
GCAAATGTGG CCACCCTGTT TGACCGGCCG GCCCACCCCT ACACTCAGGG GCTACTGGAT 
TCCATCGTGC GGCTGGGAAA CAGGCGGAAA ACAAAGCTTC CCACCATTGC CGGCATGGTG 
CCCTCCCTGG CCGAACTGCC GCCGGGATGC CGGTTTCAGA ACCGGTGCCC CAAAGTGATG 
GATATCTGCA GAAATGTCGC GCCGACCCTG GTATCCGTGG GACCGGAGCA CATGGCAAGC 
TGCCACGCGG TTCAGGAAGC GTTGCCATGA
 
Protein sequence
MNAETLLTVE NLSVSFETEA GRVRAVDRLS FEVRHGEVLG LVGESGCGKS VTALSIMRLL 
PKPSGRIDSG RVLFGGTDLA ALPPEAMRSI RGRRIAMIFQ EPMTALNPVH TIGRQLDEAY 
GLHHPEMDRP AVTAASLAML KEVGIPDPAQ RMGQYPHQIS GGMRQRVMIA MALACGPDLL 
IADEPTTALD VTIQAQILEL ITTMQQQNDM SVMLITHDLG VIAETCQRVC VMYAGTLVES 
ANVATLFDRP AHPYTQGLLD SIVRLGNRRK TKLPTIAGMV PSLAELPPGC RFQNRCPKVM 
DICRNVAPTL VSVGPEHMAS CHAVQEALP