Gene Dole_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0927 
Symbol 
ID5693762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1081454 
End bp1081915 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID641263524 
Producthypothetical protein 
Protein accessionYP_001528814 
Protein GI158520944 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000237376 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC TGACATCCAC TATAGGTATT CTTTTGCTGG TATTTGCCGT GGCGGTTCCT 
GTCATGGCAT GGGGACCCGG ATGGGGTCGC GGTCATATGA TGGGATACGG GAACAACGGA
CCCGGCGATT ATTACGGGAA CGTGACCCAG GAGCAGCGTG AAAAGCTGGA ATCCCTTGAC
CGCGCATTCT ATGATGAGAC CCGCGATATT CAGGAAAAGC TCTGGACAAA ACAGGGAGAC
CTGGAAGCGA TTCTGAATAC CACCGAACCG GATCTTGAAA AGGCAAAGGC CGTGCAGAGT
GACATCAGCC GGCTTCGGGC AAGCCTGGAC GAAAAAAGGC TGGCCTACCA GGTCGAAGTG
CGCAAGATCA CGCCCAATCA GCGGGCCTAC GGGTATGGCG GCCGGTATAA CCACATGGGG
CCCTATGGAA TGGGCTACAC CGCCGGCCAT TGCTGGAATT AA
 
Protein sequence
MTKLTSTIGI LLLVFAVAVP VMAWGPGWGR GHMMGYGNNG PGDYYGNVTQ EQREKLESLD 
RAFYDETRDI QEKLWTKQGD LEAILNTTEP DLEKAKAVQS DISRLRASLD EKRLAYQVEV
RKITPNQRAY GYGGRYNHMG PYGMGYTAGH CWN