| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0881 |
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| Symbol | |
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| ID | 5693716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1032236 |
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| End bp | 1033849 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263478 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001528768 |
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| Protein GI | 158520898 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC GTTTATCAAC CGTCGAAATA CAAGATGTTG TCATGCAGCA TAAATTCGCA
CCCATATGGA TCCTTGGAGA CCCGGCCGAT ACGGAGGACG GGGGCCTGAT CCCCGCGCTG
ACACGAATGG GCTATGCTGC CGTGTTGGTT GACCATGGCC ATCTTGCGGC CGGCCGCCCT
TTTGAACCGG CGCCGGACAT GGTGTTTCTG CCCGCCCGAA CCACCGGGCC GCCCTGGCAG
AGGACCCTGA CCCGGCTTTG TGAAACATTT CCCGGTGTCC CGGTGATTCC CGTTTTTGAT
GAAGATGCGA CTCCCGCCGA TATTCTTCTG GCCTTTCGTA CCGGCGCCTT TGACTGCCTG
GTGCTGCCGC TTCTCACCGA AGCGGCCCTG CGGCCCATGG TGGACCGTGC TCTGGATGCG
GCCCTTCGGC GCCGGCATGC ACGGCCCGGG TTTGCCGATG ATCTTCCCAT GGGTGATGTG
GCCCACCTGA AGGCCCGGCT GGTCGACGCC CAGGAAGCTC TGATCGAAGA ACGCAACAGG
CGCAGGCACG CGGAAAACGA GGCCGCGGAA CACCGGAAGG CATGGTCCAT TATCTTTGAT
AACACCCATG ATGCCGTCAT TCACATGGAC AGGGAGGGTT TCGTGGTGAA CACCAACGCG
ACCCTGTTAG ATATCTTTGG CCTTACGCCG GAGGAGGTGG TGGGCCGGGA TCTCGGCAGT
TATGATTTTC TGGGCTTTGA TTTTCGCCAG GCCCTTGAGC TGTACAAGGC GGCCCAGCCC
AATGTGGTGT TTCCGATTTT TGAGATGGAG TCCTTTCACA GGGACGGGTC CCGCATTTAT
GTAGAAAGCC GGGCCAGGCC CATTATCAAC AACAACGCAG TGGAAGGCGT GATCAATATT
GTTCGGGACG TGACGCCCCA GAAGCGGCTG GAACACACCA AAAACGCGAC AATCCTGGGA
CTGGCCAAGC TGGCCGAGTC CAGGGACGAC AGCACCGGCC GGCACCTGGA GCGGGTGCGG
GAGTATGTGC GTATTCTGAC CCAGGCCGTG GCCCGCCTGC CCAGGTACGC GGACTACGTG
ACCCCGGCCT ATATTAAAGA CATCTATCTT TCTTCGATTC TGCACGATAT CGGCAAGGTG
AGCATTCCCG ACGCCATCCT GCTCAAACCC GGCCCCCTGA CCATCGACGA ATTTGAGATT
ATCAAGCAGC ACACCCTGGT GGGGGGGAAC TCCCTGGCCG CGGTGGATGC CGAGCTGCAG
GAGCAGTCCT TTCTGACCCT GGGAAAGGAG ATCGCCTACC ATCACCACGA GTCCTGGGAT
GGCACCGGGT ATCCGGACGG GCTGGCCGGG GAACAGATTC CCCTTTCCGC CCGGATCGTG
GCCCTGGCCG ATGTGTATGA CGCATTGACC ACCGAGCGGG TTTATAAAGC CGCCTTTTCC
CATCAAAAGG CGGTTGCCAT TATACTGGAA GAACGCGGGA AAAAATTTGA CCCGGATATA
GTGGACGTTT TTGCGGCCAA CATGGAGGCG TTTGACGTCA TTCGCCGGAG AATAGGCGAA
GGTGATGCCG AATCCGGTCT TTTTCCCGGT ACGTTACGGT GTTGTTATAA GTGA
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| Protein sequence | MAERLSTVEI QDVVMQHKFA PIWILGDPAD TEDGGLIPAL TRMGYAAVLV DHGHLAAGRP
FEPAPDMVFL PARTTGPPWQ RTLTRLCETF PGVPVIPVFD EDATPADILL AFRTGAFDCL
VLPLLTEAAL RPMVDRALDA ALRRRHARPG FADDLPMGDV AHLKARLVDA QEALIEERNR
RRHAENEAAE HRKAWSIIFD NTHDAVIHMD REGFVVNTNA TLLDIFGLTP EEVVGRDLGS
YDFLGFDFRQ ALELYKAAQP NVVFPIFEME SFHRDGSRIY VESRARPIIN NNAVEGVINI
VRDVTPQKRL EHTKNATILG LAKLAESRDD STGRHLERVR EYVRILTQAV ARLPRYADYV
TPAYIKDIYL SSILHDIGKV SIPDAILLKP GPLTIDEFEI IKQHTLVGGN SLAAVDAELQ
EQSFLTLGKE IAYHHHESWD GTGYPDGLAG EQIPLSARIV ALADVYDALT TERVYKAAFS
HQKAVAIILE ERGKKFDPDI VDVFAANMEA FDVIRRRIGE GDAESGLFPG TLRCCYK
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