Gene Dole_0872 details

Gene Information

• Locus tag: Dole_0872
• ID: 5693707
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1022327
• End bp: 1024384
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641263469
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001528759
• Protein GI: 158520889
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATC TTTCAATGGC GAAAAAATTG TGGATTGCCT TTGGTGTCAT GATTCTTATC 
ATGGCGGGGA TCGGCTATAT CGGCCTGCTG CAGCTTCGTC TGGTCAACAC AGCCATGGAG 
GAGCACGGCC GGTGGAGCGA TTACCAGATC GCCATGACCG AAAAGGTCAC CCACCATGTG 
ATCAAGTTGC AGAACAAGCT GCAGAAATAC ATGACATCCG CGGCATACGA CGACCTGGAC 
GATCTGCAGA AGGAGCTGGA GATCGCCACC GACAGTTTGA AGTCGTGGTC CCAGCTTGTC 
GGGGGCGAGT CGGCCCTCAG TGAAACAACC CGTGAAGATA TGGCGTTTCT CGAGGAGATG 
TCGCTTTCGG TGTTGCGGAT CGGCAGCGCT TATACAGACC TGGAGGAGAC CCAGCGCCAG 
CTGGATGCCC TGGTTGCCCA GATGCTGGCC CAGTTGACCC AGTGCATGGA GGAGGTGGTG 
GACCCGGCCA AAACCGCCGC GATTCAGGCC CGGGACCTTC GGTCATTGAT CATGTGGAGC 
GACATCAATA TGGCGCTCAA CGAGGAGCTG ATTGCCAATG TGCTTCGTCT GCAGACCGCT 
TCCCATGATT TTGGTTTTAC CCGGGACCGG TTCACCTGGC AGCAGGTGCA GCGGCTTCAG 
GCAGCCGTTT CCGACGGACT GTCGAAGTGG AACGAGCGCG TTGCCGGCAA ACCGGACCTG 
GAAAAAGTGG CCGCCGGCGT GGCCGACTAC CTGGCAACTT TTTCTGATCT GTCGCTTCAC 
TACAATGATG TCCTTGCCCA GGTGGCGGCA CACAAGACAT CCGCCGAGGA GAAATTCGCC 
CAGAAGATCA GAGATCTTGA GGCTATTTCA CAGACAGTGG TCCAGCCCGA AAAAGCGCTG 
CGCGTTCAGG CGGCCCAACA GGCCTATGCA AAGGGGCGGG TTTTTCTTCT GATCGGTATT 
CTGATCGCGG TTGCCGTCGG CACTTTTTTC GCCGGCCTGA CCACCCGCAA CATTACCCGG 
CCCTTGCAGG CGGTGGTGGA TACATTAAAC ACCATCGCTC AGGGAGACCT GACCGCCACC 
CTGGATATCA ATCAGAAGGA CGAGGTCGGC ATGCTGGCCC GGGCCATGAC CAACATGGCG 
GAAAAGCTGA AGGCGGTGGT GATCCAGGTG CAGGGCGCTT CAGCGTACAT GGCATCCGGC 
AGCGAGGAGA TGAGTTCTTC TTCCGAGGAG CTTTCCCAGG GCTCCACCGA ACAGGCCTCC 
CACCTGGAGG AGATCACCTC CAGCATGGAA CAGATGAGTT CCAACGTCAG CCAGAACGCG 
GACAACGCTT CAGAAACCGA GCGGATCGCG GCCCAGGCGG CCCGGGACGC GGAAGAGGGC 
GGGCGCCAGG TGCAGGACAC GGTGCGGGCC ATGAAGGATA TTGCCGGCAA GACCTCTATC 
ATTGAGGAGA TCGCCCGGCA GACCAACCTG CTGGCCTTAA ACGCGGCCAT TGAAGCGGCC 
CGGGCCGGCG ACGCGGGCCG GGGCTTTGCC GTGGTGGCCG CCGAAGTGCG GAAGCTGGCC 
GAGCGCAGTG GCGAGGCGGC CAAGGAGATC GCCGGCATGT CCTCCGGCAG CGTGGCCGTG 
GCGGAGTCGG CCGGCGCCAT GCTGGAAAAG ATGGTGCCTG ATATTCGCCG GACCGCTGAG 
CTGGTGCAGG AGATCAGCGC GGCCTCCCGT GAGCAGAACG CGGGCGCGGC CCAGATCAAC 
TCCGCCATCT CCCAGCTGGA CCAGGTGGTG CAGCAGAACG CCTCCTCGGC CGAGGAGGTA 
TCTTCAACAG CCCAGGCCCT TGCCGGCCAG GCCCAGCAGC TGCAGGACAT CATGGTGTTT 
TTTAAGGTGG AGGCCGGGCA GGCGGACCAC CGGCAGACGG ACCAGGACGC CCATGAGCCG 
GAACTCCTGG AACACAGCGA CTTTCCGGCT CCTGGCACGG ATTCCGGGCA GGAACGTCTT 
GAAGATTTTA CTGGTCAGGA ACCGCCCCGG CAGCAGGGGA CAACAGATGA CATGGACCAT 
GAGTTTGAAC GGTTCTGA 

 

Protein sequence

MKNLSMAKKL WIAFGVMILI MAGIGYIGLL QLRLVNTAME EHGRWSDYQI AMTEKVTHHV 
IKLQNKLQKY MTSAAYDDLD DLQKELEIAT DSLKSWSQLV GGESALSETT REDMAFLEEM 
SLSVLRIGSA YTDLEETQRQ LDALVAQMLA QLTQCMEEVV DPAKTAAIQA RDLRSLIMWS 
DINMALNEEL IANVLRLQTA SHDFGFTRDR FTWQQVQRLQ AAVSDGLSKW NERVAGKPDL 
EKVAAGVADY LATFSDLSLH YNDVLAQVAA HKTSAEEKFA QKIRDLEAIS QTVVQPEKAL 
RVQAAQQAYA KGRVFLLIGI LIAVAVGTFF AGLTTRNITR PLQAVVDTLN TIAQGDLTAT 
LDINQKDEVG MLARAMTNMA EKLKAVVIQV QGASAYMASG SEEMSSSSEE LSQGSTEQAS 
HLEEITSSME QMSSNVSQNA DNASETERIA AQAARDAEEG GRQVQDTVRA MKDIAGKTSI 
IEEIARQTNL LALNAAIEAA RAGDAGRGFA VVAAEVRKLA ERSGEAAKEI AGMSSGSVAV 
AESAGAMLEK MVPDIRRTAE LVQEISAASR EQNAGAAQIN SAISQLDQVV QQNASSAEEV 
SSTAQALAGQ AQQLQDIMVF FKVEAGQADH RQTDQDAHEP ELLEHSDFPA PGTDSGQERL 
EDFTGQEPPR QQGTTDDMDH EFERF