| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0831 |
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| Symbol | |
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| ID | 5693666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 963910 |
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| End bp | 965631 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263428 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001528718 |
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| Protein GI | 158520848 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00169678 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGGC GGACGGACAG ACGGGATAAA ATAGGTCGGA ACGGTAAACC CATGCGCAAT
ACCGCAAACC GCAATACCGC AACCACACAG GCCGGCTCCA GGCCGCTGAT CGCGGACTGG
AACGCCCTGA TGCGGGTTTT CATCCGGCCC GAAGACGAGG CCTGCCGCAC CACCCTGATC
AAGTACATGG AGCAGATCCT CTTCGGCCTG CACGAGTTTC TGGCACAGCA CGTGGGCATC
ACCGAAGACG TCAGCCTCAA GGCCCTGGCC CGGCAGTTCA AAAGCACCGC CATCGCGGAA
AACCCGGAAA AACGGCTGGC CGAAGTCATT CAGGAACTGA TCCGGGAGAT ATCCCCCTAC
GGCGTCAACG TGGCCTCCCC CTACTTTGTG GGCCACATGA CCTCGGCCCT TCCCTTTTTC
ATGGTTCACC TGAAAACCAT TGCCGCGGCC CTCAACCAAA ACCTGGTCAA GCTGGAAACC
TCCAAAATTT TCTCTCTTCT TGAGAAACAG GTGCTGGCCA AAATCCACCG GCTGATCTAC
CGGTTTCCCG AACAGTTCTA CTGCGATCAT GTGCAGAACC CGGAAACCAC CCTGGGCAGC
TTTGTGGAGG GCGGCACCAC GGCCAATATC ACGGCCCTGT GGGTGGCGAG GAACACCTTC
TTTGCCCCGC GCAACGATTT TGCCGGCATC GAGGCCGACG GCAGTGCCGC CGCTTTTGCC
GAATACGGCG TAAAAAGAGC CGTGATCCTT GTCTCCCGCC GGGGCCACTA CTCCCTGAGA
AAGGCCGGCG GCATCCTGGG TATCGGCAAC AAAAACATTG TGGCCATCGA CGTGGACAAG
GAACATCGCT TAGACATCGG GTGCCTTGAA CAGACCATCG CCGATATCAG AAAACAGGGG
GATACCGCCA TCGTCGCGGT GGTGGGCATT GCCGGCGCCA CCGAGACCGG GGCCGTGGAC
CCGCTAAGAA AAATCGGCGA GCTCTGCGCC CGGGAAAAGC TTTTTTTCCA TGTGGATGCC
GCCTGGGGTG GACCCACGAT CCTGTCCGAC ACACACCGCC ACCTGCTCGA CGGCATCGAG
CTGGCCGACT CGGTAACCAT CGACGGCCAC AAGCAGTTCT ACATGCCCAT GAGCTGCGGC
ATGGTCTATT TCAAGAATCC GCACATCATG GATGCCGTGG CCTATCACGC CAACTACGTC
AACCGGCACG GGTCGGTGGA CCTGGGCATC CGGTCCCTGT CCGGCTCAAG GGAGGCAAAC
TCCCTGGTAT TGGACAGCGC CCTGAAAATC ATGGGGAAAA AAGGATACGC CCTGCTCATC
GAACACGGCA TTGACACGGC CCGAAAGCTG GCCGAGGAGA TCGAACGCCG GGACCTGTTT
GAAGTGGTGA CCTGGCCCCA GCTCAATATT CTCACCTACC GGGTCTGCCC GGCAGGGCTC
AAAGAGATAA TGCAAACCGG CACCGATGAA GAGCGCATCG AAGCCGTTCA TGCCCTGAAC
CACATCAACA AGACCGTTCA GCGGATACAG CGGGAAGCAG GCAAAAGCTT TGTATCGCGC
ACCACCCTGA TGCGACGGCA CTATGAAAAG GGCATCGTGG TACTGCGGTG CGTGATCATG
AACCCCCTGA CCACCATGGC GGTGCTCAAC GACATCCTGG ATGAACAGGA ATCCATCTTC
CGCCGCTACT TTCCCTCCCC TCCCCCCGTC TACCCCTCTT AA
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| Protein sequence | MPRRTDRRDK IGRNGKPMRN TANRNTATTQ AGSRPLIADW NALMRVFIRP EDEACRTTLI
KYMEQILFGL HEFLAQHVGI TEDVSLKALA RQFKSTAIAE NPEKRLAEVI QELIREISPY
GVNVASPYFV GHMTSALPFF MVHLKTIAAA LNQNLVKLET SKIFSLLEKQ VLAKIHRLIY
RFPEQFYCDH VQNPETTLGS FVEGGTTANI TALWVARNTF FAPRNDFAGI EADGSAAAFA
EYGVKRAVIL VSRRGHYSLR KAGGILGIGN KNIVAIDVDK EHRLDIGCLE QTIADIRKQG
DTAIVAVVGI AGATETGAVD PLRKIGELCA REKLFFHVDA AWGGPTILSD THRHLLDGIE
LADSVTIDGH KQFYMPMSCG MVYFKNPHIM DAVAYHANYV NRHGSVDLGI RSLSGSREAN
SLVLDSALKI MGKKGYALLI EHGIDTARKL AEEIERRDLF EVVTWPQLNI LTYRVCPAGL
KEIMQTGTDE ERIEAVHALN HINKTVQRIQ REAGKSFVSR TTLMRRHYEK GIVVLRCVIM
NPLTTMAVLN DILDEQESIF RRYFPSPPPV YPS
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