Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0807 |
Symbol | |
ID | 5693642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 934616 |
End bp | 935548 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641263404 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001528694 |
Protein GI | 158520824 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATCC CGGATATTCG AATAAAGGAG AGTGTTATGA GAATAAAACG CTGGGAAAAA ATCGGGGTGT TGCTGCTGGC CCTGGTATGG GTTGCCGGGT GTGGCCAGTC CCATGAGCCT GGCTTTCTGG GGTCCGGCAC CCTGGAGGCC ACCGAAGTGG TGATCAGCGC CCAGACCGGC GGCACGGTAA CCGACCTTTC CCGTGAGGAG GGCCAGAAGG CGGCTGCCGG GGACCTGCTG GCCGTCATCG ACGTGGAAAA ACTGGAACTC CAGCGAAAAC GCCTGGCTGC CGGGCTTGCC GAGGTGGCCG CCAACCGGAC CGCCGCGGAC GCGGCCGTGG CCCAGGCTGA AGATACCCTG GCCAACGTGG AGACCCAGTA CCGCCGCATA AAGGAGCTGC ATGACCGGGG ATCGGCCACC CAGAAACAGC TGGATGACAT TACCACGCAG CTTGCCGTGG CCAAAAACCA GGTGGCCGGG GCCCGGGCCC AGCTGCCGAT GCTGGACGCG AAAAAGGCCC AGATCGAGGC GGAACTGGCC CTGGCCGACC GGCAGATCGC CGACGGCCGG GTGACCTCGC CCATCAACGG CACGGTGGTG GAAAAGTACA TGGAAGCCGG GGAAACGGCA ATGCCGGGGA GCCGGATTTA CAAGCTTGCA GACCTTGGCC GCTTCTGGGT TCATATTTAC GTGGCCGCCG AAGACCTGGG CAATATCACC ATCGGCCAGA AGGTTGAGGT GCGGGCCGAT GCCGTGGACA CCCCCTTTAG CGGCACCATT GCCTGGACAT CGCCGGAAGC CGAGTTTACC CCCAAAAACG TCCAGACCCG AAAGGCCCGG TCCGAGCTGG TCTATGCCGT CAAGGTCATT CTGGATACCG GTGCCGATGT GCTGAAAATC GGCATGCCGG TGGAGGTTTA CGCTCAGCCA TGA
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Protein sequence | MFIPDIRIKE SVMRIKRWEK IGVLLLALVW VAGCGQSHEP GFLGSGTLEA TEVVISAQTG GTVTDLSREE GQKAAAGDLL AVIDVEKLEL QRKRLAAGLA EVAANRTAAD AAVAQAEDTL ANVETQYRRI KELHDRGSAT QKQLDDITTQ LAVAKNQVAG ARAQLPMLDA KKAQIEAELA LADRQIADGR VTSPINGTVV EKYMEAGETA MPGSRIYKLA DLGRFWVHIY VAAEDLGNIT IGQKVEVRAD AVDTPFSGTI AWTSPEAEFT PKNVQTRKAR SELVYAVKVI LDTGADVLKI GMPVEVYAQP
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