Gene Dole_0709 details

Gene Information

• Locus tag: Dole_0709
• Symbol: rplD
• ID: 5693544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 841414
• End bp: 842031
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641263306
• Product: 50S ribosomal protein L4
• Protein accession: YP_001528596
• Protein GI: 158520726
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0382078
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGTTG TAGATATAAA AAATATGAAC GGGGAAACGG TTTCTCAGGC AGAACTTCCC 
GACAGCATCT TCGATGTGGA GGTCAAGTCG AGCGTTCTGC ACGAGGTGGT AAAAATGCAG 
CTGGCGCGCA GGCGTTCGGG AACCGCTTCC ACCAAGGGGC GGTCCGATGT GGCGGGCAGC 
CGGGCCAAAC TTTTTCGCCA GAAGGGCACG GGCCGTGCCC GGCGGGGCGA TGTCAAGTCG 
CCGCTGCTGA AAGGCGGGGG CGTTGTTTTC GGTCCCCATC CCCGCTCCTT TGATTACAGT 
GTGCCCAAGA AAGTCAGGAA ACTGGCGCTG AAAATGGCAC TGACCAGCAA GCTGCGGGAC 
AACACCCTGA CCGTTGTGGA CCAGTTCCGG TTCGACAGGA TCAAGACAAA GGACTTTGTC 
GGTGCCATCA ATGCGCTGGG TGCCGCCAAC GCCCTGGTCA TCTCCGACGG CAGTGAGACC 
CTTGAAAAGT CGGCCCGCAA CGTGCCGAAG GTAAAGGTGC TCAAATGCGA GGGGCTGAAT 
GTTTACGACA TTCTTAAATA CAAGAATCTC GTTCTGCCCG AGGCGGCGAT CAAGATGATA 
GAGGGGAGGC TTTTGTAA 

 

Protein sequence

MAVVDIKNMN GETVSQAELP DSIFDVEVKS SVLHEVVKMQ LARRRSGTAS TKGRSDVAGS 
RAKLFRQKGT GRARRGDVKS PLLKGGGVVF GPHPRSFDYS VPKKVRKLAL KMALTSKLRD 
NTLTVVDQFR FDRIKTKDFV GAINALGAAN ALVISDGSET LEKSARNVPK VKVLKCEGLN 
VYDILKYKNL VLPEAAIKMI EGRLL