Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0697 |
Symbol | |
ID | 5693532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 826507 |
End bp | 827037 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641263294 |
Product | NusG antitermination factor |
Protein accession | YP_001528584 |
Protein GI | 158520714 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00804947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGTTAA AATGGTATGT GGTGCACGTT TATTCCGGCT TTGAAAACAA GGTCCAGAAG TCCCTGGAGG ACCGTATCGC ATCGTCCGGC TGCGCCGAGA AGTTCGGCGA GGTGATCGTG CCCACCGAGC AGGTGGTCGA GCTGGTCAAG GGCAAGAAAA AGGAGTCGTC GCGTAAGTTT TATCCCGGAT ATATCCTTGT CCAGATGGAA CTTGACGACG AAACATGGCA CGTGGTGGCC AACACGGCCA AGGTGACCGG TTTTCTGGGC GGCAAGAACA AGCCGGCGCC GATCACCGAC CAGGAGGCGG ACAAGATCCT GGAGCGGATC GAGGCGGGCA AGCTGAAACC CCAGCCCAAG TACTCTTTTG AGGTGGGTGA TGAGGTGCGG GTGACCGAAG GTCCCTTTGC CACCTTCAGT GGCCTGGTGG AGACCGTGAA CCAAGAGAAG GGAAAGCTGC GGGTCCTGGT GAGCATCTTC GGGCGTTCCA CGCCGGTTGA ACTGGATTTC ATGCAGGTTG CGAAACTATA A
|
Protein sequence | MALKWYVVHV YSGFENKVQK SLEDRIASSG CAEKFGEVIV PTEQVVELVK GKKKESSRKF YPGYILVQME LDDETWHVVA NTAKVTGFLG GKNKPAPITD QEADKILERI EAGKLKPQPK YSFEVGDEVR VTEGPFATFS GLVETVNQEK GKLRVLVSIF GRSTPVELDF MQVAKL
|
| |