Gene Dole_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0636 
Symbol 
ID5693465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp755313 
End bp756506 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content51% 
IMG OID641263227 
Productintegrase family protein 
Protein accessionYP_001528523 
Protein GI158520653 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00117125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCCC CCTATGGTCC CCCCCAAAAA GATGGAAAGG TCAATAAAAT GGCAATATTG 
ATAAGGTGTA TAGCCTGCAA GACAGAGACA AAATTGACGG CAAAGAAGTG TCCTGGGTGT
GGCGCGGCCT TCCCTGTCCG GAATAAAACC TATAAAGTCA CAGTCAAACA TGGCGGCAAA
AAGAAAACCA AACTGGTGGA TAACCTGGAC CTTGCCCGTG AAATTGAAAC CAAACTCAAA
CATGATATTA CACGAGGCAC ATTCCACCTG CAAACACAAA AACAGGCACC GACCCTTGAT
GCGTTTTGGG ATAAAGACTA CTTGCCCTGG ATACGGTCAA ATAAAAAAAG CTGGTATGAG
GATGCCATTA ACTATCAAAC CCACCTGGCC CCGAAACTCG GTCAGAAGCG ACTGGATGCC
ATAACACAGC TTGACATTGA ACGGCTGTTG TCTGGTTTGC GTAAAGGCAC AAGCAAGCGC
GGCAAGCCAT ACGCGGCGGC CACCATCAAA CATCAAATCG TTTTGTTGAC CAGAATGTTT
AATGTGGCGG CCAGATGGGG GAAATACACT GGCCCGAATC CCTGCAAGCT GATTGCAAAA
CCCCGGCTGA ACAACCAGAA AACCGGCTTT CTGACCGATG ATGAATTGAC CCGTTTGCTT
GATGTTCTGG AACAGTGGCC TGACCGGATG TCGGCGGGGT TTATTGCCTT CCTGCTTCAC
ACCGGATTAA GGCGCGGCGA ACTGTTCCGG CTGACCTGGC AGGATGTCAA TATGGATCGG
CAAACCCTGA CCGTTAGAGA CCCCAAAGGC GGCAGGGATA CGGTCTTGCC GTTATCTGAA
AAAGCCATTG ATGCCCTGAA CAGCCTGCCA CGGGAACATG AGACGCCATT TGTTTTTTAT
GGCAGAAACG GCGCACAAAG AGCCGATTTC CGGCACCCCT GGTATAGAAT CAAGCAGGCG
GCGGCCCTGC CTGAAGGCTT CCGGCTCCAC GATCTGCGGC ACCACTTTGC AAGCGCCCTG
GTGTCTGCTG GTACGAACCT TTACACCGTT CAGGCCTTGC TGACCCATAA AAGCGCGGCC
ATGACGCAAC GGTATGCCCA CTTAAGCGAT CAAGCCTTAA GGGATGCGGT GAAACTGTCG
GATGACCTGT CAAAGAAGGC CACAAGCGAC ACAAAGGCGA TGAAACGTGG ATAA
 
Protein sequence
MWSPYGPPQK DGKVNKMAIL IRCIACKTET KLTAKKCPGC GAAFPVRNKT YKVTVKHGGK 
KKTKLVDNLD LAREIETKLK HDITRGTFHL QTQKQAPTLD AFWDKDYLPW IRSNKKSWYE
DAINYQTHLA PKLGQKRLDA ITQLDIERLL SGLRKGTSKR GKPYAAATIK HQIVLLTRMF
NVAARWGKYT GPNPCKLIAK PRLNNQKTGF LTDDELTRLL DVLEQWPDRM SAGFIAFLLH
TGLRRGELFR LTWQDVNMDR QTLTVRDPKG GRDTVLPLSE KAIDALNSLP REHETPFVFY
GRNGAQRADF RHPWYRIKQA AALPEGFRLH DLRHHFASAL VSAGTNLYTV QALLTHKSAA
MTQRYAHLSD QALRDAVKLS DDLSKKATSD TKAMKRG